Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05191 and BL03439
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:19
# Commandline: needle
# -asequence pep-align/BSNT_05191___yveM.1.5803.seq
# -bsequence pep-align/BL03439___yveM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05191___yveM-BL03439___yveM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05191___yveM-BL03439___yveM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05191___yveM
# 2: BL03439___yveM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity: 406/608 (66.8%)
# Similarity: 483/608 (79.4%)
# Gaps: 13/608 ( 2.1%)
# Score: 2050.5
#
#
#=======================================
BSNT_05191___ 1 --------MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGALLLTAVSLLL 42
:|.|||:||||.|:..|||.:..||..|.|..||:|::.||.
BL03439___yve 1 MTYRRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLG 50
BSNT_05191___ 43 SYHVCAFLFNQYKQVWTYTGLGELIVLLKGITLSAAVTGIIQYAVYHTMF 92
:.|:.|..|:.||:||.|..:|||.||||.||||..||..::...:..:.
BL03439___yve 51 AQHLFAHCFHLYKKVWEYASIGELYVLLKSITLSHLVTAALELFFFQNVP 100
BSNT_05191___ 93 FRLLTACWVLQLLSIGGTRILSRVLNESIRKKRCASSRALIIGAGSGGTL 142
.|||...|:.||:.|||:|::.|::.|.:.|:...|.|||||||||.|:|
BL03439___yve 101 VRLLCLSWLFQLILIGGSRMMWRIIREQVNKESKGSLRALIIGAGSAGSL 150
BSNT_05191___ 143 MVRQLLSKDEPDIIPVAFIDDDQTKHKLEIMGLPVIGGKESIMPAVQKLK 192
:.:||:.|.|.:|.||||||||:||::||||||||:||||.||.||::..
BL03439___yve 151 IAKQLVQKPELNIKPVAFIDDDKTKYRLEIMGLPVLGGKEQIMQAVRQWN 200
BSNT_05191___ 193 INYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRTAGQIR 242
|:.||||||||...::|.:||.|.:|||..:|||..||:|||....||:|
BL03439___yve 201 IDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEILLGRHPVGQLR 250
BSNT_05191___ 243 DVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQ 292
||||||||||:||.||||||||.:|.:.|||||||||||||||||||.|:
BL03439___yve 251 DVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFK 300
BSNT_05191___ 293 PKEIILLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMKK 342
||.|||:||||||||||..||..:||||:.::.||||:|||:|||.||::
BL03439___yve 301 PKSIILVGHGENSIHSILLELKEKFGKHVAYYPEIADIQDREKMFLLMER 350
BSNT_05191___ 343 YEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVL 392
|:|:|:|||||||||||||..|:|||||||:||||||||||.:..|||||
BL03439___yve 351 YKPNVIYHAAAHKHVPLMEKCPKEAVKNNILGTKNVAEAADETEVETFVL 400
BSNT_05191___ 393 ISSDKAVNPANVMGATKRFAEMIIMNLGKVSRTKFVAVRFGNVLGSRGSV 442
|||||||||||:||||||||||:||||||.|:||||||||||||||||||
BL03439___yve 401 ISSDKAVNPANIMGATKRFAEMLIMNLGKTSKTKFVAVRFGNVLGSRGSV 450
BSNT_05191___ 443 IPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQAGALAKGRQIFVL 492
||||||||.|||||||||..||||||||||||||||||||||||||||||
BL03439___yve 451 IPIFKKQIAKGGPVTVTHQDMTRYFMTIPEASRLVIQAGALAKGRQIFVL 500
BSNT_05191___ 493 DMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELLNKNEVH 542
||||||||||||||||.||||||||:.||||||||||||||||||:|||.
BL03439___yve 501 DMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKMYEELLNQNEVL 550
BSNT_05191___ 543 AEQIFPKIHIGKAVDGDWPVLMRFIEDFHKLPEADLRARLFAAINTSEE- 591
|||:|||||||||||.:|.||..|:::|..|.:.:||.|||.||...|:
BL03439___yve 551 AEQVFPKIHIGKAVDVEWTVLKSFMDEFMYLSDRELRERLFKAIGQHEKK 600
BSNT_05191___ 592 -MTAASVH 598
:||.
BL03439___yve 601 LVTAH--- 605
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