Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05193 and BL03437

See DNA alignment / Visit BSNT_05193 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:19
# Commandline: needle
#    -asequence pep-align/BSNT_05193___yveK.1.5803.seq
#    -bsequence pep-align/BL03437___yveK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05193___yveK-BL03437___yveK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05193___yveK-BL03437___yveK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05193___yveK
# 2: BL03437___yveK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     117/254 (46.1%)
# Similarity:   165/254 (65.0%)
# Gaps:          24/254 ( 9.4%)
# Score: 530.0
# 
#
#=======================================

BSNT_05193___      1 MNENMSFKELYAIVRHRFVLILLITIGVTLIMGFVQFKVISPTYQASTQV     50
                     |.||:.|:||.||:|.|.||||::||||||..|.:||.|::|.||||||:
BL03437___yve      1 MKENIDFRELIAILRKRTVLILVLTIGVTLTTGIIQFYVLTPVYQASTQI     50

BSNT_05193___     51 LVHESDGEE--NSNLSDIQRNLQYSSTFQSIMKSTALMEEVKAELHLSES     98
                     |||:. ||:  ::..||||.||||:.|||:::|:..::|:||.||.|..|
BL03437___yve     51 LVHQV-GEKKGSATYSDIQINLQYTRTFQALLKNPVILEQVKRELDLPYS     99

BSNT_05193___     99 ASSLKGKVVTSSENESEIINVAVQDHDPAKAAEIANTLVNKFEKEVDERM    148
                     |..|..|:.||||:||||||::|||.:..:||:|||||....:||:.:.|
BL03437___yve    100 AGRLGEKIATSSESESEIINISVQDENQKRAADIANTLTAVLKKEIKQIM    149

BSNT_05193___    149 NVQGVHILSEAKASESPM-IKPARLRNMVMAFGAAVMGGITLAFFLHFLD    197
                     |...|.:||:|:..:||. ::|....|:::|||||:|.||.|||||.|:|
BL03437___yve    150 NTDRVTVLSKAEIVDSPTPVRPNYKMNILLAFGAALMTGIALAFFLDFID    199

BSNT_05193___    198 DTCKSARQLSERTGLPCLGSV-------------PD----VHKGRNRGIK    230
                     ||.....|:.:..|...|||:             ||    |..||:..:.
BL03437___yve    200 DTVARPSQVEKEAGFIYLGSIEQMKHKKSLFRGDPDMNIRVKAGRSEPLG    249

BSNT_05193___    231 HFGE    234
                     :   
BL03437___yve    250 Y---    250


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