Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05280 and BL03425

See DNA alignment / Visit BSNT_05280 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence pep-align/BSNT_05280___yvdB.1.5803.seq
#    -bsequence pep-align/BL03425___yvdB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05280___yvdB-BL03425___yvdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05280___yvdB-BL03425___yvdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05280___yvdB
# 2: BL03425___yvdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 542
# Identity:     369/542 (68.1%)
# Similarity:   449/542 (82.8%)
# Gaps:          15/542 ( 2.8%)
# Score: 1895.5
# 
#
#=======================================

BSNT_05280___      1 -MRFSGRFKGYNLQKFQKDLIAGIVVGVVAIPLGMAFAIASGVEPEYGLY     49
                      :||||||:||:|::||||::||:|||||||||||||||||||:||:|||
BL03425___yvd      1 MLRFSGRFEGYSLKRFQKDIVAGMVVGVVAIPLGMAFAIASGVKPEHGLY     50

BSNT_05280___     50 TVVIAGICISLFGGSKYQIGGPTGAFVPILFGIVMQYGLENLLIAGFMAG     99
                     ||::|||.|||.|||||||||||||||||||.||:|||.|||||||||||
BL03425___yvd     51 TVIVAGILISLLGGSKYQIGGPTGAFVPILFAIVLQYGFENLLIAGFMAG    100

BSNT_05280___    100 VMLVLFGLFKLGKIMKFVPKPVIVGFTAGIAVLIFTEQIANFLGLRNVEK    149
                     |:||:.||.|||||:||:|:|||:||||||||:|||.:||.|||||||||
BL03425___yvd    101 VILVILGLLKLGKIIKFIPRPVIIGFTAGIAVIIFTGEIAKFLGLRNVEK    150

BSNT_05280___    150 HENFHHNMFEIVQQLGTFNVYAILTAVIGLVILLVSAKVMPKVPGALLAL    199
                     ||:|:.||.|:|..|.|.:.|:|||||:.|..:|.:.||:|||||||..|
BL03425___yvd    151 HESFYMNMREVVINLNTLSFYSILTAVVSLFFVLFTPKVLPKVPGALAGL    200

BSNT_05280___    200 LISTVVAVVFFPDRMATIGSTYGEIPRHLPEFQFPELTLDKMVMLFPAAL    249
                     |:|||:|.:.||:::.||||.||||||.||.||||||:|:|::.|.|.||
BL03425___yvd    201 LVSTVMATMLFPEQVVTIGSAYGEIPRSLPSFQFPELSLEKIIYLMPPAL    250

BSNT_05280___    250 VIALLGGLESILSAMVADNMKGSKHDSNKELVGQGIANMAAPLFGGIPAT    299
                     .||:|||:||:|||||||||||::||||||||||||||:|||||||||||
BL03425___yvd    251 AIAMLGGIESLLSAMVADNMKGTRHDSNKELVGQGIANIAAPLFGGIPAT    300

BSNT_05280___    300 GAIARTATNIKNGAVSPVSGVVHGVVVLLVLLVFAPYASHVPLASMAPIL    349
                     |||||||||||.||.||:||:||||.||||||:||||||.:|||||:|||
BL03425___yvd    301 GAIARTATNIKTGAASPISGIVHGVFVLLVLLLFAPYASLIPLASMSPIL    350

BSNT_05280___    350 MVVAWNMSERKEVANMLRLKNADSFILAATFALTVLFDLIIGVATGLLLA    399
                     ||||||||||||..|:|:::|:||.:|..||.|||..||:.|||.|:|||
BL03425___yvd    351 MVVAWNMSERKEFINILKIRNSDSAVLVVTFLLTVWQDLVFGVAAGILLA    400

BSNT_05280___    400 FVFFIRRMSEATRIHNQETHPVL-------AKREDPSVSMYAIEGPLFFG    442
                     .:.||.|||::.||....:..::       .|....|||:|::|||||||
BL03425___yvd    401 IITFIARMSKSFRIKKDVSESIVQSAAAAEEKHFQRSVSIYSVEGPLFFG    450

BSNT_05280___    443 SIDSLESSLLE--HVQKKPKTLILLMNKVHYMDTSAEAVLGNIMNRIKRH    490
                     |.:|||.|:|:  |   .||.||||||||.|||:|||..|..|:||:.:.
BL03425___yvd    451 SSNSLEDSILDKGH---PPKLLILLMNKVDYMDSSAEGSLMTIVNRVHQQ    497

BSNT_05280___    491 NGKLMIVGLQSQPKELLHKTGLFHKIGKQHFFDHHDEITG--    530
                     |||:||||||.||:||||||||||||||:||.|..::|..  
BL03425___yvd    498 NGKVMIVGLQQQPRELLHKTGLFHKIGKKHFVDRPEQIFDVT    539


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05280 and BL03425

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
