Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05289 and BL03422

See DNA alignment / Visit BSNT_05289 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_05289___yvcN.1.5803.seq
#    -bsequence pep-align/BL03422___nat.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05289___yvcN-BL03422___nat.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05289___yvcN-BL03422___nat.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05289___yvcN
# 2: BL03422___nat
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     120/257 (46.7%)
# Similarity:   165/257 (64.2%)
# Gaps:          11/257 ( 4.3%)
# Score: 611.5
# 
#
#=======================================

BSNT_05289___      1 MSDFLKDCFQKIGWEK-DHVSFGDLPLFLKAMAYRFPFENRAVLAKENYK     49
                     |:..|...|::||::. ..|:|.|||.||..:|.:|||||.|||..|...
BL03422___nat      1 MTTMLDSLFKRIGYKPGQQVTFADLPEFLSLLALQFPFENGAVLRNERIS     50

BSNT_05289___     50 ITKEELWRRLLKDQHGGLCYDLNGFLYFVLREAGFHVKLIRGTVYAGDQE     99
                     :||.||...||.::.||||||||.|||:||.|.||.|.::||||:...::
BL03422___nat     51 MTKTELTEALLNNKRGGLCYDLNAFLYYVLTELGFSVHMVRGTVFNAKEQ    100

BSNT_05289___    100 GWALEGTHAAVWLSAENGDYLVDIGFGINLALQPIPLSGETVQSPVGSFR    149
                     .|||.|||.||.|...:..||:|.||||||.|.|:|.|||.|.|..|::|
BL03422___nat    101 AWALTGTHVAVILREGDETYLLDTGFGINLPLAPVPFSGEPVPSKTGAYR    150

BSNT_05289___    150 IKREETEKGSHVLLMDKGEGWQIGYAFTLEESDLGDLDNMKDIIHSHEKS    199
                     |:..:|:||.::|.||||:||||||||:|...|...|..::|.|...:.|
BL03422___nat    151 IRETKTDKGDYLLEMDKGDGWQIGYAFSLTPIDEAVLTCVRDAIFDEKAS    200

BSNT_05289___    200 PFNKSPLASKLTPSGRMVMSERHFTIHENGSDIQKSDIGPSEFEEKLNTH    249
                     ||||:||||||...|::::::.||| .:.|..:.|.|:...:|:    |.
BL03422___nat    201 PFNKNPLASKLIKDGKLILTKDHFT-KQTGGGLTKEDVNAGDFQ----TI    245

BSNT_05289___    250 FL-----    251
                     |:     
BL03422___nat    246 FVHSFFD    252


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