Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05291 and BL03420
See
DNA alignment /
Visit
BSNT_05291 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence pep-align/BSNT_05291___yvcL.1.5803.seq
# -bsequence pep-align/BL03420___yvcL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05291___yvcL-BL03420___yvcL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05291___yvcL-BL03420___yvcL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05291___yvcL
# 2: BL03420___yvcL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity: 291/316 (92.1%)
# Similarity: 305/316 (96.5%)
# Gaps: 0/316 ( 0.0%)
# Score: 1461.0
#
#
#=======================================
BSNT_05291___ 1 MSFASETKKELTNLEVKDCCINAELSALIRMNGALSFTNRHLVLDVQTEN 50
||||||||||||||||||||..|||||||||||:|||:||.:||||||||
BL03420___yvc 1 MSFASETKKELTNLEVKDCCAKAELSALIRMNGSLSFSNRKVVLDVQTEN 50
BSNT_05291___ 51 AAIARRIYTLLKKQYDVSVELLVRKKMRLKKNNVYIVRFSENAKTILEDL 100
||||||||||||||||||||||||||||||||||||||..||||.|||||
BL03420___yvc 51 AAIARRIYTLLKKQYDVSVELLVRKKMRLKKNNVYIVRLIENAKPILEDL 100
BSNT_05291___ 101 KILGENFVFERSISKELVKKRCCKRSYMRGAFLAGGSVNNPETSSYHLEI 150
||||:|||..|:||::||||||||||||||||||||||||||||||||||
BL03420___yvc 101 KILGDNFVIARNISEDLVKKRCCKRSYMRGAFLAGGSVNNPETSSYHLEI 150
BSNT_05291___ 151 FSLYKEHNDSLCDLLNEFQLNSKTLERKKGYITYLKEAEKITEFLNVIGA 200
||||||||||||.|:|:|.|||||||||||||||||||||||||||||||
BL03420___yvc 151 FSLYKEHNDSLCRLMNQFHLNSKTLERKKGYITYLKEAEKITEFLNVIGA 200
BSNT_05291___ 201 HNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLRQVENIKYIDE 250
||||||||||||||||||||||||||||||||||||||||||||||.|||
BL03420___yvc 201 HNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLRQVENIKLIDE 250
BSNT_05291___ 251 RIGLEALPEKLREIAQLRIDYQEVTLKELGEMVASGKISKSGINHRLRKL 300
||||:||||||||||||||||||||||||||||:||||||||||||||||
BL03420___yvc 251 RIGLDALPEKLREIAQLRIDYQEVTLKELGEMVSSGKISKSGINHRLRKL 300
BSNT_05291___ 301 DEIAEQLRTGQTVTLK 316
||||||||:||:|:||
BL03420___yvc 301 DEIAEQLRSGQSVSLK 316
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.