Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05291 and BL03420
See
Amino acid alignment /
Visit
BSNT_05291 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence dna-align/BSNT_05291___yvcL.1.5803.seq
# -bsequence dna-align/BL03420___yvcL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05291___yvcL-BL03420___yvcL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05291___yvcL-BL03420___yvcL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05291___yvcL
# 2: BL03420___yvcL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 952
# Identity: 734/952 (77.1%)
# Similarity: 734/952 (77.1%)
# Gaps: 2/952 ( 0.2%)
# Score: 2786.0
#
#
#=======================================
BSNT_05291___ 1 ATGTCATTTGCATCAGAAACAAAAAAAGAATTAACGAATCTGGAAGTGAA 50
||||||||||||||.|||||.|||||||||.|.||.||.||.|||||.||
BL03420___yvc 1 ATGTCATTTGCATCGGAAACGAAAAAAGAACTTACAAACCTTGAAGTAAA 50
BSNT_05291___ 51 GGACTGCTGCATTAATGCCGAGCTGTCTGCACTCATTCGGATGAATGGAG 100
|||.||||||...||.||.|||||.|||||.||||||||||||||.||..
BL03420___yvc 51 GGATTGCTGCGCGAAAGCAGAGCTCTCTGCCCTCATTCGGATGAACGGTT 100
BSNT_05291___ 101 CTTTATCATTTACAAACCGCCATCTCGTACTCGATGTTCAAACCGAAAAC 150
|.||.||.||..|||||||..|..|.||.|||||.||.||.|||||.|||
BL03420___yvc 101 CATTGTCTTTCTCAAACCGAAAAGTGGTTCTCGACGTCCAGACCGAGAAC 150
BSNT_05291___ 151 GCGGCGATTGCCCGCCGCATCTATACATTGCTGAAAAAACAATATGATGT 200
|||||.||.|||.|..|.||.||.|||||||||||.||||||||.|||||
BL03420___yvc 151 GCGGCCATCGCCAGAAGAATTTACACATTGCTGAAGAAACAATACGATGT 200
BSNT_05291___ 201 GTCGGTCGAGCTGCTGGTCAGAAAGAAAATGCGGCTGAAAAAGAATAACG 250
.||.||.||.|||||.||..|||||||||||.|.||||||||.||.||.|
BL03420___yvc 201 TTCCGTTGAACTGCTCGTTCGAAAGAAAATGAGACTGAAAAAAAACAATG 250
BSNT_05291___ 251 TCTATATTGTGCG-TTTTTCAGAAAATGCAAAAACGATCTTAGAGGATTT 299
||||.||.||.|| .|..|| ||||||||.||..||||..|.|||||.||
BL03420___yvc 251 TCTACATCGTACGCCTGATC-GAAAATGCCAAGCCGATTCTCGAGGACTT 299
BSNT_05291___ 300 AAAAATACTCGGGGAGAATTTTGTGTTTGAACGAAGTATTTCGAAAGAGC 349
.|||||||||||.||.||.|||||..|||...|||..||.||..||||..
BL03420___yvc 300 GAAAATACTCGGAGACAACTTTGTCATTGCCAGAAACATCTCCGAAGACT 349
BSNT_05291___ 350 TGGTTAAAAAGAGGTGCTGCAAGCGTTCTTATATGAGAGGAGCATTTTTG 399
|.||.|||||..|.||||||||.||.||||||||||||||.||||||||.
BL03420___yvc 350 TAGTCAAAAAACGATGCTGCAAACGGTCTTATATGAGAGGGGCATTTTTA 399
BSNT_05291___ 400 GCAGGAGGTTCGGTCAATAACCCGGAAACCTCCTCGTATCATTTAGAAAT 449
||.||.|||||.|||||.||.||.||.||.||.||.||.||..|.||.||
BL03420___yvc 400 GCCGGGGGTTCTGTCAACAATCCCGAGACATCTTCTTACCACCTCGAGAT 449
BSNT_05291___ 450 CTTCTCTCTTTATAAGGAGCATAACGATTCATTATGTGACCTGTTAAATG 499
.||.||.||.||.||.||||||||.||||||||.||....||..|.|||.
BL03420___yvc 450 TTTTTCGCTGTACAAAGAGCATAATGATTCATTGTGCAGGCTCATGAATC 499
BSNT_05291___ 500 AGTTTCAGTTAAACAGCAAAACGCTTGAACGGAAAAAAGGCTATATTACC 549
||||.||.||||||||||||||||||||.||||||||.||.||.||.||.
BL03420___yvc 500 AGTTCCATTTAAACAGCAAAACGCTTGAGCGGAAAAAGGGATACATCACG 549
BSNT_05291___ 550 TATTTAAAAGAGGCTGAAAAGATTACAGAGTTTCTGAACGTAATTGGCGC 599
|||.|.||.||.||.|||||.||.||.||||||.||||.||.||.|||||
BL03420___yvc 550 TATCTGAAGGAAGCCGAAAAAATCACCGAGTTTTTGAATGTGATCGGCGC 599
BSNT_05291___ 600 TCACAATTCGCTTCTGCGATTTGAGGATGTCAGAATCGTCCGGGACATGA 649
.||.||||||||.||.||.|||||.||.|||.|.|||||.||.||.||||
BL03420___yvc 600 GCATAATTCGCTGCTCCGCTTTGAAGACGTCCGGATCGTGCGCGATATGA 649
BSNT_05291___ 650 GAAATTCGGTCAACCGCCTCGTCAATTGTGAAACAGCCAACTTAAACAAA 699
||||.|||||||||||.|||||||||||.||.||.|||||.|||||||||
BL03420___yvc 650 GAAACTCGGTCAACCGGCTCGTCAATTGCGAGACCGCCAATTTAAACAAA 699
BSNT_05291___ 700 ACGATCGGCGCATCGCTGAGACAGGTGGAAAATATTAAATACATCGATGA 749
|||||||||||.||.|||.|.|||||||||||.||.||....|||||.||
BL03420___yvc 700 ACGATCGGCGCTTCTCTGCGGCAGGTGGAAAACATCAAGCTGATCGACGA 749
BSNT_05291___ 750 AAGAATCGGCCTGGAGGCGCTGCCTGAAAAACTTCGGGAAATTGCGCAGC 799
|||||||||.||.||.||||||||.|||||.||..|||||||.||.||||
BL03420___yvc 750 AAGAATCGGGCTTGATGCGCTGCCGGAAAAGCTGAGGGAAATCGCTCAGC 799
BSNT_05291___ 800 TTCGGATTGATTATCAGGAAGTGACGCTGAAAGAGCTGGGGGAAATGGTA 849
|.||.|||||||||||||||||.||..|.||.||.||.|||||||||||.
BL03420___yvc 800 TCCGCATTGATTATCAGGAAGTAACATTAAAGGAACTCGGGGAAATGGTG 849
BSNT_05291___ 850 GCAAGCGGGAAAATCAGCAAATCAGGGATCAATCACAGGCTGAGAAAACT 899
.|.|||||.||||||||||||||.||.|||||.|||.|.||.||.|||||
BL03420___yvc 850 TCGAGCGGAAAAATCAGCAAATCGGGCATCAACCACCGACTTAGGAAACT 899
BSNT_05291___ 900 TGACGAAATCGCAGAACAGCTGCGGACTGGGCAAACCGTCACTTTAAAAT 949
.||.|||||.||.||.||||||||..|.||.|||.|.|||.|||||||||
BL03420___yvc 900 GGATGAAATAGCTGAGCAGCTGCGTTCAGGACAATCTGTCTCTTTAAAAT 949
BSNT_05291___ 950 AA 951
|.
BL03420___yvc 950 AG 951
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.