Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05293 and BL03417

See DNA alignment / Visit BSNT_05293 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_05293___yvcJ.1.5803.seq
#    -bsequence pep-align/BL03417___yvcJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05293___yvcJ-BL03417___yvcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05293___yvcJ-BL03417___yvcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05293___yvcJ
# 2: BL03417___yvcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     263/295 (89.2%)
# Similarity:   279/295 (94.6%)
# Gaps:           0/295 ( 0.0%)
# Score: 1371.0
# 
#
#=======================================

BSNT_05293___      1 MSVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLE     50
                     |:.:..|||||||||||||||||||||||||||:||||||||||||||||
BL03417___yvc      1 MNANGGHDIQLVIITGMSGAGKTVAIQSFEDLGFFCVDNLPPSLLPKFLE     50

BSNT_05293___     51 LMKESNSKMSKVALVMDLRGREFFDRLIEALDEMAENPWITPRILFLDAK    100
                     |||||:|||||||||||||||||||.|||||||:.|..||||||||||||
BL03417___yvc     51 LMKESSSKMSKVALVMDLRGREFFDSLIEALDEIGETSWITPRILFLDAK    100

BSNT_05293___    101 DSILVTRYKETRRSHPLAATGLPLEGIALERELLEELKGRSQIIYDTSDM    150
                     ||:||:||||||||||||.||||||||..|||||||||||||||||||||
BL03417___yvc    101 DSVLVSRYKETRRSHPLATTGLPLEGIQTERELLEELKGRSQIIYDTSDM    150

BSNT_05293___    151 KPRDLREKIVKHFATNQGETFTVNVMSFGFKYGIPIDADLVFDVRFLPNP    200
                     ||:|||||||:|||.:.|.||||||||||||||:||||||||||||||||
BL03417___yvc    151 KPKDLREKIVQHFAADHGHTFTVNVMSFGFKYGLPIDADLVFDVRFLPNP    200

BSNT_05293___    201 YYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFMLPSYKREGKS    250
                     |||:|||||||||:|||||||||||||||.|||.:|||||||||||||||
BL03417___yvc    201 YYIDSMRPLTGKDQEVSSYVMKWNETQKFLEKLTELLSFMLPSYKREGKS    250

BSNT_05293___    251 QVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK    295
                     |:||||||||||||||||||.||||||||||||||||||||:|||
BL03417___yvc    251 QLVIAIGCTGGQHRSVTLAEYLADYFKKDYYTHVTHRDIEKKSRK    295


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