Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05293 and BL03417
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence dna-align/BSNT_05293___yvcJ.1.5803.seq
# -bsequence dna-align/BL03417___yvcJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05293___yvcJ-BL03417___yvcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05293___yvcJ-BL03417___yvcJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05293___yvcJ
# 2: BL03417___yvcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 890
# Identity: 713/890 (80.1%)
# Similarity: 713/890 (80.1%)
# Gaps: 4/890 ( 0.4%)
# Score: 2833.0
#
#
#=======================================
BSNT_05293___ 1 ATGAGTGTTAGTGAATCACATGATATTCAGCTTGTCATTATAACCGGAAT 50
||||..|..|.||.|...||||||||.||||||||.||.|||||||||||
BL03417___yvc 1 ATGAACGCGAATGGAGGCCATGATATACAGCTTGTGATCATAACCGGAAT 50
BSNT_05293___ 51 GTCGGGAGCGGGGAAAACTGTCGCGATTCAAAGCTTTGAAGATCTCGGCT 100
|||.||.||.||.|||||.||.||||||||||||||||||||||||||.|
BL03417___yvc 51 GTCAGGGGCAGGAAAAACAGTGGCGATTCAAAGCTTTGAAGATCTCGGTT 100
BSNT_05293___ 101 ATTTCTGCGTCGATAATCTTCCGCCTTCATTGCTTCCGAAGTTTTTAGAG 150
.||||||.|||||||||||.|||||.||.|||||.|||||.|||||.|||
BL03417___yvc 101 TTTTCTGTGTCGATAATCTGCCGCCATCTTTGCTGCCGAAATTTTTGGAG 150
BSNT_05293___ 151 CTGATGAAGGAATCAAATTCGAAAATGAGCAAAGTTGCGCTCGTGATGGA 200
||||||||||||||||.|||.||||||||||||||.||.||.||.|||||
BL03417___yvc 151 CTGATGAAGGAATCAAGTTCAAAAATGAGCAAAGTCGCCCTTGTTATGGA 200
BSNT_05293___ 201 TCTGCGTGGCCGCGAATTTTTTGACCGGCTGATTGAAGCGCTGGATGAAA 250
|.||||.||||||||.|||||||||.|.||||||||||||||.|||||||
BL03417___yvc 201 TTTGCGCGGCCGCGAGTTTTTTGACAGCCTGATTGAAGCGCTTGATGAAA 250
BSNT_05293___ 251 TGGCCGAAA-ATCCGTGGATCACACCGCGAATTTTATTCCTGGACGCGAA 299
|.|..|||| |||| |||||.||.||||||||||||||..|.||.||.||
BL03417___yvc 251 TTGGGGAAACATCC-TGGATTACCCCGCGAATTTTATTTTTAGATGCCAA 299
BSNT_05293___ 300 GGATTCCATTCTCGTCACAAGATATAAAGAAACGAGACGCTCGCATCCGC 349
||||||..|||||||..|||||||||||||.||.|||.|.||.|||||.|
BL03417___yvc 300 GGATTCGGTTCTCGTTTCAAGATATAAAGAGACAAGAAGATCCCATCCCC 349
BSNT_05293___ 350 TGGCAGCGACTGGCCTGCCGCTTGAAGGCATCGCGCTGGAACGAGAGCTG 399
|.||..|.||.||||||||||||||.||||||.....|||.||.|||||.
BL03417___yvc 350 TTGCGACAACGGGCCTGCCGCTTGAGGGCATCCAAACGGAGCGGGAGCTT 399
BSNT_05293___ 400 CTTGAGGAATTAAAAGGCCGCTCTCAAATCATTTACGATACGTCTGACAT 449
||.||.||..|.||||||||.|||||||||||.||.|||||.||.||.||
BL03417___yvc 400 CTCGAAGAGCTGAAAGGCCGTTCTCAAATCATCTATGATACATCCGATAT 449
BSNT_05293___ 450 GAAGCCGCGTGATTTGCGTGAAAAAATCGTGAAGCACTTTGCGACAAACC 499
|||||||...||..||||.|||||||||||..||||.||||||.||.|.|
BL03417___yvc 450 GAAGCCGAAAGACCTGCGCGAAAAAATCGTCCAGCATTTTGCGGCAGATC 499
BSNT_05293___ 500 AAGGAGAGACATTTACCGTAAATGTGATGTCATTTGGTTTTAAATACGGT 549
|.|||.|.||.|||||.||.||||||||||||||.||.|||||||||||
BL03417___yvc 500 ACGGACATACCTTTACTGTGAATGTGATGTCATTCGGGTTTAAATACGG- 548
BSNT_05293___ 550 ATT-CCAATTGATGCAGATCTCGTCTTTGATGTCAGATTTTTGCCGAATC 598
||| ||.||.||.||.|||||.||.||.||.||.|||||..|.||.||||
BL03417___yvc 549 ATTGCCGATCGACGCTGATCTAGTGTTCGACGTAAGATTCCTTCCCAATC 598
BSNT_05293___ 599 CGTACTATATCGAAAGCATGCGGCCGCTGACTGGCAAGGATAAAGAGGTT 648
|||||||||||||.||||||.||||||||||.||.||.||..|.||.||.
BL03417___yvc 599 CGTACTATATCGACAGCATGAGGCCGCTGACGGGGAAAGACCAGGAAGTA 648
BSNT_05293___ 649 TCCTCTTACGTCATGAAGTGGAATGAAACACAAAAGTTCAATGAGAAATT 698
||.||.||.||.|||||.|||||.|||||.||||||||...|||.|||||
BL03417___yvc 649 TCTTCATATGTGATGAAATGGAACGAAACGCAAAAGTTTCTTGAAAAATT 698
BSNT_05293___ 699 AATTGATCTGCTGAGCTTTATGCTTCCATCTTATAAAAGAGAAGGAAAAA 748
.|..||.||||||||||||||||||||.||.||.||..||||||||||||
BL03417___yvc 699 GACCGAGCTGCTGAGCTTTATGCTTCCGTCATACAAGCGAGAAGGAAAAA 748
BSNT_05293___ 749 GCCAGGTTGTCATTGCGATCGGCTGCACAGGGGGCCAGCACCGCTCTGTG 798
|||||.|||||||.|||||.||||||||.||.||.|||||.||.||||||
BL03417___yvc 749 GCCAGCTTGTCATCGCGATTGGCTGCACCGGCGGACAGCATCGTTCTGTG 798
BSNT_05293___ 799 ACATTAGCCGAGAATTTAGCTGATTATTTCAAAAAGGATTACTATACTCA 848
||..|.||.||..|..|.||.||||||||.||||||||.|||||||||||
BL03417___yvc 799 ACGCTGGCTGAATACCTTGCCGATTATTTTAAAAAGGACTACTATACTCA 848
BSNT_05293___ 849 TGTTACTCACCGGGACATTGAAAAGAGAAGCCGGAAATAA 888
||||||||||||||||||.||.||||.||||.|.|||||.
BL03417___yvc 849 TGTTACTCACCGGGACATCGAGAAGAAAAGCAGAAAATAG 888
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