Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05294 and BL03416

See DNA alignment / Visit BSNT_05294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence pep-align/BSNT_05294___yvcI.1.5803.seq
#    -bsequence pep-align/BL03416___yvcI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05294___yvcI-BL03416___yvcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05294___yvcI-BL03416___yvcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05294___yvcI
# 2: BL03416___yvcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     122/158 (77.2%)
# Similarity:   140/158 (88.6%)
# Gaps:           4/158 ( 2.5%)
# Score: 685.0
# 
#
#=======================================

BSNT_05294___      1 MTYLQRVTNCVLQTDDKVLLLQKPRRGWWVAPGGKMESGESVRDSVIREY     50
                        :||||||||.:.|||||||||||||||||||||||||:|||:|||||
BL03416___yvc      1 ---MQRVTNCVLTSGDKVLLLQKPRRGWWVAPGGKMESGETVRDAVIREY     47

BSNT_05294___     51 REETGIYIINPQLKGVFTFIIKDGDHIVSEWMMFTFVADSYTGQNVSESE    100
                     |||||:|::||||||:||||||:.|.:||||||||||||.|||::|.|||
BL03416___yvc     48 REETGLYVLNPQLKGIFTFIIKENDQVVSEWMMFTFVADHYTGKHVEESE     97

BSNT_05294___    101 EGKLQWHDVNDIQNLPMAPGDGHILDFMMKGQGLLHGTFTYTPDFELLSY    150
                     ||.::||...|:.:|||||||.||||||:||:||||||||||||||||||
BL03416___yvc     98 EGIIRWHQAGDVGSLPMAPGDVHILDFMLKGKGLLHGTFTYTPDFELLSY    147

BSNT_05294___    151 RLDPQHIK    158
                     |||||.. 
BL03416___yvc    148 RLDPQGE-    154


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