Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05294 and BL03416
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence dna-align/BSNT_05294___yvcI.1.5803.seq
# -bsequence dna-align/BL03416___yvcI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05294___yvcI-BL03416___yvcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05294___yvcI-BL03416___yvcI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05294___yvcI
# 2: BL03416___yvcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity: 348/504 (69.0%)
# Similarity: 348/504 (69.0%)
# Gaps: 66/504 (13.1%)
# Score: 1230.5
#
#
#=======================================
BSNT_05294___ 1 GTGACGTACTTGCAAAGAGTGACAAATTGTGTG----CTTCAGACGGATG 46
||||||||||||||.||||||||| ||||| |.||
BL03416___yvc 1 ---------TTGCAAAGAGTGACGAATTGTGTGCTGACTTCA----GGTG 37
BSNT_05294___ 47 ACAAAGTTCTTCTGCTTCAAAAGCCGAGACGCGGCTGGTGGGTCGCGCCG 96
|.|||||.||..||||.||||||||.|||||.|||||||||||.||.||.
BL03416___yvc 38 ATAAAGTCCTGTTGCTGCAAAAGCCCAGACGAGGCTGGTGGGTGGCCCCC 87
BSNT_05294___ 97 GGCGGCAAGATGGAGAGCGGAGAATCAGTCAGAGACTCCGTCATCAGAGA 146
||||||||.|||||.|||||.|||.|.|||||.|||.||||.|||||.||
BL03416___yvc 88 GGCGGCAAAATGGAAAGCGGGGAAACCGTCAGGGACGCCGTTATCAGGGA 137
BSNT_05294___ 147 GTACAGAGAAGAGACTGGTATCTATATCATAAATCCTCAATTAAAAGGCG 196
.|||.|.||||||||.||..|.|||.|..|.||.||.||..|.|||||..
BL03416___yvc 138 ATACCGCGAAGAGACGGGCCTGTATGTGCTGAACCCGCAGCTGAAAGGAA 187
BSNT_05294___ 197 TTTTTACCTTTATTATTAAAGACGGTGACCACATTGTCTCCGAGTGGATG 246
|.||.||||||||.||.||.||...|||.||..||||.||.||.||||||
BL03416___yvc 188 TATTCACCTTTATCATAAAGGAAAATGATCAGGTTGTATCTGAATGGATG 237
BSNT_05294___ 247 ATGTTTACGTTTGTCGCTGATTCA-TATACAGGACAA-AATGTATCAGAA 294
|||||.||.||.|||||.|| ||| |||||||| ||| .|||||..||||
BL03416___yvc 238 ATGTTCACATTCGTCGCCGA-TCATTATACAGG-CAAGCATGTAGAAGAA 285
BSNT_05294___ 295 TCGGAGGAAGGGA--AACTGCAGTGGCACGATGTCAATGACATTCAG--- 339
||.||.|||||.| |.|.| |||||| ||||
BL03416___yvc 286 TCAGAAGAAGGCATCATCAG--GTGGCA---------------TCAGGCG 318
BSNT_05294___ 340 ------------AACCTGCCTATGGCCCCTGGAGACGGCCATATCCTTGA 377
|.|.||||.|||||.||.||.||||.||||||.|||||
BL03416___yvc 319 GGGGACGTCGGTAGCTTGCCGATGGCGCCGGGCGACGTCCATATTCTTGA 368
BSNT_05294___ 378 TTTTATGATGAAGGGACAAGGGCTGCTGCACGGCACATTTACGTATACAC 427
|||||||.||||.||..||||.|||||.||||||||.|||||||||||.|
BL03416___yvc 369 TTTTATGCTGAAAGGCAAAGGACTGCTTCACGGCACCTTTACGTATACGC 418
BSNT_05294___ 428 CGGACTTTGAGCTGCTCAGT--TATCGTTTAGACCCGCA--GCACATCAA 473
|.||||||||..|||| || |||||..|.|||||||| ||..||.|
BL03416___yvc 419 CTGACTTTGAATTGCT--GTCCTATCGCCTCGACCCGCAAGGCGAATAA- 465
BSNT_05294___ 474 ATAG 477
BL03416___yvc 465 ---- 465
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