Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05299 and BL03414
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence pep-align/BSNT_05299___yvcD.1.5803.seq
# -bsequence pep-align/BL03414___yvcD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05299___yvcD-BL03414___yvcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05299___yvcD-BL03414___yvcD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05299___yvcD
# 2: BL03414___yvcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 487
# Identity: 307/487 (63.0%)
# Similarity: 386/487 (79.3%)
# Gaps: 4/487 ( 0.8%)
# Score: 1633.5
#
#
#=======================================
BSNT_05299___ 1 MGKHTSEHKNHAQIVQLLQDGQYFFHKGLKAYKERNLKRASKLIQRAVHL 50
|||:||||...::||||.||||||:|||||||:||||.|||||||||:.|
BL03414___yvc 1 MGKYTSEHHKDSRIVQLFQDGQYFYHKGLKAYRERNLSRASKLIQRAIFL 50
BSNT_05299___ 51 EPEDSEMLSQLAVIYSEMGQYQESNDLLDYIMANLEAEMPECHYFKANNF 100
|||::.|||||||||:|||.||:||:|||:|:.|:..:|.||:||||||:
BL03414___yvc 51 EPENTGMLSQLAVIYTEMGFYQQSNELLDFILKNINEKMTECYYFKANNY 100
BSNT_05299___ 101 AHLGLFQEAYKEAAAYSDADPDGEFAEENDSLLDLLDLGDDGIEDSLYDQ 150
|||||||||||.|..|...||||||:|||..||||||:|::....|.:||
BL03414___yvc 101 AHLGLFQEAYKAAETYLKEDPDGEFSEENAELLDLLDMGEEDQGYSQFDQ 150
BSNT_05299___ 151 DELLVKQDRAKSLLESGQLAEAVAALEEITAEYPELWSAYNNLALAYFYS 200
|:|::||||||||||:|||.|::|.||||.::|||.|||||||||||||:
BL03414___yvc 151 DDLILKQDRAKSLLENGQLQESIAMLEEIISDYPEFWSAYNNLALAYFYA 200
BSNT_05299___ 201 GNVVKAKQTAYEVLSHNEGNLHALCNLLVFYYYEREDEKVAELSDQLSNV 250
|:|.|||.|.:.||..:.||||||||||:||:|||.|:||..||:||||:
BL03414___yvc 201 GDVQKAKTTVFTVLEKSHGNLHALCNLLIFYHYERRDDKVEALSEQLSNI 250
BSNT_05299___ 251 YPMLLEQRYKLGATLALVGRYEIGYKWLKSLYKIGFEGDDTFFYWLSCSA 300
||||.||||||||||||||||::|:|||||||::|||||:||:|||:|||
BL03414___yvc 251 YPMLFEQRYKLGATLALVGRYDLGFKWLKSLYRMGFEGDETFYYWLACSA 300
BSNT_05299___ 301 YFTGHTDFAETIWRKVESQYPGEDRPAPWIERREALP--SSVEQRLAAYY 348
|:||...||.::|:|::.:||.:.|..||.||:|..| ..:|:||||||
BL03414___yvc 301 YYTGRVQFARSVWKKMQEEYPDDARMEPWKERKEKRPVQRPLEERLAAYY 350
BSNT_05299___ 349 ISSTKGETEHLEAVIRSKRITAPFENHFVKLLLNGDSGAADVSEDALFAY 398
||..|||...|:||:.|:....|||:.||:|:|.|:||||..|:|||.||
BL03414___yvc 351 ISGRKGEKAQLKAVLDSQMAKTPFEDQFVRLVLYGESGAAVDSKDALLAY 400
BSNT_05299___ 399 QTVKLLEQAEKEEMKTEVMSCWVFHVIQQIRAVA-PLKNEKGWAAAICYI 447
:|.|.:|||::..|:.|.|..|:|||||||||.. .|||..|.||||.||
BL03414___yvc 401 RTAKAIEQADQSAMEQEAMCFWIFHVIQQIRAYGLQLKNAGGLAAAIYYI 450
BSNT_05299___ 448 WKEAHGKQDTKKDTAARFGISPATLTKYMKYIDDILE 484
||..|.::.||.:||..|.|||.||:||.:.:.:.|
BL03414___yvc 451 WKTEHQERLTKAETAKIFQISPGTLSKYERTLKEHL- 486
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