Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05308 and BL03410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence pep-align/BSNT_05308___hisH.1.5803.seq
# -bsequence pep-align/BL03410___hisH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05308___hisH-BL03410___hisH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05308___hisH-BL03410___hisH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05308___hisH
# 2: BL03410___hisH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 145/212 (68.4%)
# Similarity: 171/212 (80.7%)
# Gaps: 0/212 ( 0.0%)
# Score: 754.0
#
#
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BSNT_05308___ 1 MIGVIDYGMGNLYSVSKALERVGVPYFVSEKPEELKEADAFILPGVGSFG 50
|||||||||||||||||||||:..||||||.|:|||.||::||||||:|.
BL03410___his 1 MIGVIDYGMGNLYSVSKALERIDAPYFVSEHPDELKRADSYILPGVGAFR 50
BSNT_05308___ 51 DAMDNLRYTKLDQLIHDMVSEGRLLLGICLGMQLLFEESEENGTASGLGL 100
|||:.|....|...|....:||:.|||||||||||||||||:|.:.||||
BL03410___his 51 DAMEILTENGLKTFIQAAANEGKPLLGICLGMQLLFEESEEHGASEGLGL 100
BSNT_05308___ 101 LKGKAVRLKAEDEKGNKLKVPHMGWNRLSFHNESPLLTKTEQGYAYFVHS 150
||||.|:||..|:.||:|||||||||.|..|.:||||.|.::|:||||||
BL03410___his 101 LKGKVVKLKDCDQAGNRLKVPHMGWNLLKVHRDSPLLPKAKEGFAYFVHS 150
BSNT_05308___ 151 YYIDGMEEDSLLASTDYGVRVPAVVGKRNVFGAQFHPEKSSTVGMSILTQ 200
||:.|:||::||||.:|||.||||||..||:||||||||||||||.||.:
BL03410___his 151 YYVSGIEEEALLASAEYGVCVPAVVGLGNVYGAQFHPEKSSTVGMLILER 200
BSNT_05308___ 201 FTKMAAKQKVKK 212
|.:...:|||||
BL03410___his 201 FKQFTQEQKVKK 212
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