Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05325 and BL03403
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:25
# Commandline: needle
# -asequence pep-align/BSNT_05325___yvoD.1.5803.seq
# -bsequence pep-align/BL03403___yvoD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05325___yvoD-BL03403___yvoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05325___yvoD-BL03403___yvoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05325___yvoD
# 2: BL03403___yvoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity: 244/315 (77.5%)
# Similarity: 278/315 (88.3%)
# Gaps: 3/315 ( 1.0%)
# Score: 1253.0
#
#
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BSNT_05325___ 1 MKKIFLAGLAAGLQTTWTLGKVIFPVTLLVTLLQHTPVMDWLVRLITPVM 50
||....||..|||:||||||||||||||:|:|||||||||||::||||.|
BL03403___yvo 1 MKGTLKAGAVAGLKTTWTLGKVIFPVTLIVSLLQHTPVMDWLIKLITPAM 50
BSNT_05325___ 51 SLFGLSGEAAIPLVLGNMLNLYAGIAGILTLDLSVKEVFILAVMLSFCHN 100
.:|||||||||||||||||||||||||||||||:||||||||||||||||
BL03403___yvo 51 GIFGLSGEAAIPLVLGNMLNLYAGIAGILTLDLTVKEVFILAVMLSFCHN 100
BSNT_05325___ 101 LIIESTVAAKVGIRIGVILAVRIGLAAVSAIVINLIWHGGKETAQYGFIA 150
||||||||::|||:|.:||.||||||..|||:|||:||||::.|:||.|:
BL03403___yvo 101 LIIESTVASRVGIKIWLILLVRIGLAVFSAIIINLVWHGGQDAAKYGLIS 150
BSNT_05325___ 151 AKSAAPDSWLGMLAEALTKAGLGVLQLAAIVIPLMIIIQFLRDLGWLHRF 200
||||||..|..:..||:||||||||||||||||||||||::||||||:.|
BL03403___yvo 151 AKSAAPSGWFDIALEAVTKAGLGVLQLAAIVIPLMIIIQYMRDLGWLNAF 200
BSNT_05325___ 201 SRWLSPFTQLLGMNKNTSMTMVAGLTISLAYGAGVMIKAVEDDGVSKRDM 250
|:|.:|.|::|||.:||||||||||||.|||||||||||||:|||||||:
BL03403___yvo 201 SKWFAPITRMLGMKENTSMTMVAGLTIGLAYGAGVMIKAVEEDGVSKRDV 250
BSNT_05325___ 251 TLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRVTTAVLLTMAIAHTWK 300
||||||||||||||||||||||||||||||||||:.||||||:||:..|:
BL03403___yvo 251 TLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRLATAVLLTIAISRFWR 300
BSNT_05325___ 301 KWKPSAVGKEAI--- 312
|...|...|||:
BL03403___yvo 301 KPGYSVRRKEALYES 315
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