Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05325 and BL03403
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:25
# Commandline: needle
# -asequence dna-align/BSNT_05325___yvoD.1.5803.seq
# -bsequence dna-align/BL03403___yvoD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05325___yvoD-BL03403___yvoD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05325___yvoD-BL03403___yvoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05325___yvoD
# 2: BL03403___yvoD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 966
# Identity: 709/966 (73.4%)
# Similarity: 709/966 (73.4%)
# Gaps: 45/966 ( 4.7%)
# Score: 2488.0
#
#
#=======================================
BSNT_05325___ 1 ATGAAGAAGATCTTT-CTGGCCGGTCTTGCGGCAGGTCTTCAAACAACAT 49
|||||| .||.|||| ...|||||...||.|||.||.||..|||||||.|
BL03403___yvo 1 ATGAAG-GGAACTTTAAAAGCCGGCGCTGTGGCGGGGCTGAAAACAACGT 49
BSNT_05325___ 50 GGACACTCGGTAAAGTGATTTTCCCGGTAACGCT-ATTGGTCA--CTTTG 96
||||.||.||.|||||||||||.||.||.||||| ||| |||| |||
BL03403___yvo 50 GGACGCTTGGAAAAGTGATTTTTCCTGTCACGCTGATT-GTCAGCCTT-- 96
BSNT_05325___ 97 CTTCAGCATACCCCTGTCATGGATTGGCTTG-TACGGCTGATCACACCGG 145
|||||||||||.||.||.|||||.||| ||| |....||||||||.||||
BL03403___yvo 97 CTTCAGCATACACCGGTGATGGACTGG-TTGATCAAACTGATCACGCCGG 145
BSNT_05325___ 146 TAATGAGTCTCTTCGGGCTTTCTGGTGAAGCGGCCATTCCGCTTGTACTG 195
..|||.|..|.||||||.|.||.||.||||||||.||.||||||||.||.
BL03403___yvo 146 CGATGGGGATTTTCGGGTTGTCAGGGGAAGCGGCGATACCGCTTGTGCTC 195
BSNT_05325___ 196 GGAAATATGCTGAATCTGTATGCGGGAATTGCCGGGATTTTAACATTGGA 245
||.||.||||||||..|||||||.||||||||.||.||||||||..|.||
BL03403___yvo 196 GGCAACATGCTGAACTTGTATGCCGGAATTGCGGGAATTTTAACGCTTGA 245
BSNT_05325___ 246 TTTATCTGTGAAAGAAGTCTTTATTTTAGCTGTTATGCTTTCATTCTGTC 295
|||..|.||.||||||||.|||||||||||.||||||||.||.||.||.|
BL03403___yvo 246 TTTGACCGTTAAAGAAGTGTTTATTTTAGCGGTTATGCTGTCGTTTTGCC 295
BSNT_05325___ 296 ATAACTTGATTATCGAATCGACAGTTGCCGCAAAGGTTGGTATCAGAAT- 344
|.||||||||||||||.|||||.|||||..|||.|||.||.||||.|||
BL03403___yvo 296 ACAACTTGATTATCGAGTCGACTGTTGCTTCAAGGGTCGGAATCAAAATA 345
BSNT_05325___ 345 TGGCGTCATATTGGCCGTGCGCATCGGTTTGGCCGCTGTGTCAGCCATCG 394
|||| |.||.|||..|||||||||||||.|.||.|.|.|.||.|||||..
BL03403___yvo 346 TGGC-TGATTTTGCTCGTGCGCATCGGTCTCGCTGTTTTTTCGGCCATTA 394
BSNT_05325___ 395 TCATCAACCTCATTTGGCATGGCGGAAAGGAAACGGCGCAGTACGGTTTT 444
||||||||||..|.|||||||||||..||||..||||..|.|||||.||.
BL03403___yvo 395 TCATCAACCTTGTCTGGCATGGCGGGCAGGATGCGGCCAAATACGGCTTA 444
BSNT_05325___ 445 ATCGCTGCGAAGAGCGCCGCGCCAGACAGCTGGCTAGGAATGTTG-GC-A 492
|||.|.|||||.||||||||.||...|.|||||.|.| |..||| || |
BL03403___yvo 445 ATCTCAGCGAAAAGCGCCGCTCCTTCCGGCTGGTTTG--ACATTGCGCTA 492
BSNT_05325___ 493 GAAGCATTAACGAAAGCCGGACTTGGTGTTTTGCAGCTGGCGGCAATTGT 542
|||||..|.||.||.||.||.||||||||..|.|||||.||.||.||.||
BL03403___yvo 493 GAAGCCGTGACCAAGGCGGGTCTTGGTGTCCTTCAGCTTGCAGCCATCGT 542
BSNT_05325___ 543 CATACCGCTGATGATCATCATCCAGTTTTTAAGAGATTTAGGCTGGCTGC 592
.||||||||||||||||||||.||.|.|.|.|||||..|.|||||||||.
BL03403___yvo 543 AATACCGCTGATGATCATCATTCAATATATGAGAGACCTCGGCTGGCTGA 592
BSNT_05325___ 593 ATCGGTTTTCCAGGTGGCTGTCGCCGTTTACGCAG-CTGCTTGGCATGAA 641
||...|||||.|.||||.|..|.|||.|.||| || .|||||||.|||||
BL03403___yvo 593 ATGCTTTTTCAAAGTGGTTTGCACCGATAACG-AGAATGCTTGGAATGAA 641
BSNT_05325___ 642 TAAAAATACGTCTATGACGATGGTGGCGGGACTGACGATTAGTCTGGCCT 691
..|.||.||.||.|||||.|||||.||.||.||||||||..|.||.||.|
BL03403___yvo 642 AGAGAACACCTCAATGACAATGGTTGCCGGGCTGACGATCGGCCTTGCAT 691
BSNT_05325___ 692 ACGGAGCGGGTGTCATGATCAAAGCTGTCGAGGATGACGGCGTGAGCAAG 741
||||.||.||.||.|||||||||||.|||||.||.||||||||.|||||.
BL03403___yvo 692 ACGGGGCCGGCGTTATGATCAAAGCGGTCGAAGAAGACGGCGTCAGCAAA 741
BSNT_05325___ 742 CGGGATATGACATTGGCATTTATATTTCTCGTTGCCTGCCACGCGGTCGT 791
.|||||.|.||..|.||.|||||.||||||||.||||||||||||||.||
BL03403___yvo 742 AGGGATGTCACGCTTGCTTTTATTTTTCTCGTCGCCTGCCACGCGGTTGT 791
BSNT_05325___ 792 GGAAGATACACTTGTCTTTATTCCGCTCGGCATACCAGTCTGGCCGCTTC 841
.|||||||||.|.||.|||||.|||||||||||.||.||||||||.|||.
BL03403___yvo 792 TGAAGATACATTGGTATTTATCCCGCTCGGCATTCCGGTCTGGCCTCTTT 841
BSNT_05325___ 842 TTTTGATTCGTGTCACCACAGCAGTTCTGCTGACAATGGCTATTGCGCAC 891
|.|||||..|..|..|.||.||.|||||||||||.||.||.|||.|||.|
BL03403___yvo 842 TGTTGATCAGGCTTGCGACCGCGGTTCTGCTGACGATCGCGATTTCGCGC 891
BSNT_05325___ 892 ACGTGGAAAAAATGGAAACCC-------TCAGCGGTTG--GAAAGGAAGC 932
...|||| ||||.|| || ||.|.| ||||||||||
BL03403___yvo 892 TTCTGGA-------GAAAGCCGGGTTATTC--CGTTCGCAGAAAGGAAGC 932
BSNT_05325___ 933 --AATATGA------- 939
..|||||
BL03403___yvo 933 TTTGTATGAAAGTTAA 948
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