Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05326 and BL03402

See DNA alignment / Visit BSNT_05326 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:25
# Commandline: needle
#    -asequence pep-align/BSNT_05326___lgt.1.5803.seq
#    -bsequence pep-align/BL03402___lgt.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05326___lgt-BL03402___lgt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05326___lgt-BL03402___lgt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05326___lgt
# 2: BL03402___lgt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     217/270 (80.4%)
# Similarity:   247/270 (91.5%)
# Gaps:           1/270 ( 0.4%)
# Score: 1187.0
# 
#
#=======================================

BSNT_05326___      1 MNEAIEPLNPIAFQLGPLAVHWYGIIIGLGALLGLWIAMRESEKRGLQKD     50
                     |||.|||||||||||||:||||||||||||||||||:|:||.|:|||.||
BL03402___lgt      1 MNETIEPLNPIAFQLGPIAVHWYGIIIGLGALLGLWLAVREGERRGLHKD     50

BSNT_05326___     51 TFIDLVLFAIPIAIICARIYYVAFEWDYYAAHPGEIIKIWKGGIAIHGGL    100
                     ||:|||||||||||:|||.|||.|:|.||:.||.:||:||.||:||||||
BL03402___lgt     51 TFVDLVLFAIPIAILCARAYYVIFQWGYYSEHPDQIIQIWNGGLAIHGGL    100

BSNT_05326___    101 IGAILTGYVFSRVKNLSFWKLADIAAPSILLGQAIGRWGNFMNQEAHGEA    150
                     |||:|||.::::||.|||||||||||||||||||||||||||||||||||
BL03402___lgt    101 IGAVLTGIIYAKVKGLSFWKLADIAAPSILLGQAIGRWGNFMNQEAHGEA    150

BSNT_05326___    151 VSRAFLENLHLPEFIINQMYINGQYYHPTFLYESLWSFVGVIVLLLLRRA    200
                     ||||||||||||:||||||||:||||.|||||||||||.||:||||||:|
BL03402___lgt    151 VSRAFLENLHLPDFIINQMYIDGQYYQPTFLYESLWSFTGVVVLLLLRKA    200

BSNT_05326___    201 NLRRGEMFLIYIIWYSIGRYFIEGMRTDSLMLTDSLRIAQVISIVLIVLA    250
                     ||:|||:||||:||||:|||||||:||||||||::||||||||||||:.|
BL03402___lgt    201 NLKRGELFLIYVIWYSMGRYFIEGLRTDSLMLTENLRIAQVISIVLILCA    250

BSNT_05326___    251 VAAIIFRRVKGYSKERYAE-    269
                     .|.|.:||.||...:||.| 
BL03402___lgt    251 AALIAYRRFKGREIKRYQEM    270


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