Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05327 and BL03401

See DNA alignment / Visit BSNT_05327 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_05327___hprK.1.5803.seq
#    -bsequence pep-align/BL03401___hprK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05327___hprK-BL03401___hprK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05327___hprK-BL03401___hprK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05327___hprK
# 2: BL03401___hprK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     278/310 (89.7%)
# Similarity:   302/310 (97.4%)
# Gaps:           0/310 ( 0.0%)
# Score: 1426.0
# 
#
#=======================================

BSNT_05327___      1 MAKVRTKDVMEQFNLELISGEEGINRPITMSDLSRPGIEIAGYFTYYPRE     50
                     |.||||||||::|.|||||||||||||||||||||||:|:||||||||:|
BL03401___hpr      1 MPKVRTKDVMDKFKLELISGEEGINRPITMSDLSRPGLEMAGYFTYYPKE     50

BSNT_05327___     51 RVQLLGKTELSFFEQLPEEEKKQRMDSLCTDVTPAIILSRDMPIPQELID    100
                     |||||||||::|||:||||||||||.||||::|||||||||:|||.||::
BL03401___hpr     51 RVQLLGKTEITFFEKLPEEEKKQRMLSLCTEITPAIILSRDLPIPPELVE    100

BSNT_05327___    101 ASEKNGVPVLRSPLKTTRLSSRLTNFLESRLAPTTAIHGVLVDIYGVGVL    150
                     |||:|||||||||||||||:|||||||||:|||||||||||||:||||||
BL03401___hpr    101 ASEENGVPVLRSPLKTTRLTSRLTNFLESQLAPTTAIHGVLVDVYGVGVL    150

BSNT_05327___    151 ITGKSGVGKSETALELVKRGHRLVADDCVEIRQEDQDTLVGNAPELIEHL    200
                     |.|||||||||||||||||||||||||||||||||||||:|:||||||||
BL03401___hpr    151 IIGKSGVGKSETALELVKRGHRLVADDCVEIRQEDQDTLIGSAPELIEHL    200

BSNT_05327___    201 LEIRGLGIINVMTLFGAGAVRSNKRITIVMNLELWEQGKQYDRLGLEEET    250
                     ||||||||||||||||||||||.||||:||:|||||||||||||||||||
BL03401___hpr    201 LEIRGLGIINVMTLFGAGAVRSFKRITLVMSLELWEQGKQYDRLGLEEET    250

BSNT_05327___    251 MKIIDTEITKLTIPVRPGRNLAVIIEVAAMNFRLKRMGLNAAEQFTNKLA    300
                     ||||||::.|||||||||||||||||||||||||||||||||||||:|||
BL03401___hpr    251 MKIIDTDVPKLTIPVRPGRNLAVIIEVAAMNFRLKRMGLNAAEQFTHKLA    300

BSNT_05327___    301 DVIEDGEQEE    310
                     |||||||.||
BL03401___hpr    301 DVIEDGELEE    310


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