Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05327 and BL03401
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:26
# Commandline: needle
# -asequence dna-align/BSNT_05327___hprK.1.5803.seq
# -bsequence dna-align/BL03401___hprK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05327___hprK-BL03401___hprK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05327___hprK-BL03401___hprK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05327___hprK
# 2: BL03401___hprK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 934
# Identity: 730/934 (78.2%)
# Similarity: 730/934 (78.2%)
# Gaps: 2/934 ( 0.2%)
# Score: 2822.0
#
#
#=======================================
BSNT_05327___ 1 GTGGCAAAGGTTCGCACAAAAGACGTAATGGAACAGTTCAATTTGGAATT 50
|||.|.||.|||||.||||||||.||.|||||..|.||.||..|.||..|
BL03401___hpr 1 GTGCCGAAAGTTCGAACAAAAGATGTGATGGATAAATTTAAGCTTGAGCT 50
BSNT_05327___ 51 AATCAGCGGAGAAGAAGGAATTAACCGCCCGATTACAATGAGTGACCTAT 100
.|||||||||||||||||.||.||||||||||||||.|||||.||..|||
BL03401___hpr 51 CATCAGCGGAGAAGAAGGGATCAACCGCCCGATTACGATGAGCGATTTAT 100
BSNT_05327___ 101 CAAGACCAGGCATTGAAATTGCCGGATATTTTACATATTACCCGAGAGAG 150
|||||||.|||.|||||||.||.||.|||||||||||.||.||.|.||||
BL03401___hpr 101 CAAGACCGGGCCTTGAAATGGCTGGTTATTTTACATACTATCCAAAAGAG 150
BSNT_05327___ 151 CGCGTGCAGCTTCTCGGAAAAACAGAGCTTTCTTTCTTTGAACAGCTTCC 200
.|.||.|||||.||.||.||.||.|||.||.|.||.||||||.|||||||
BL03401___hpr 151 AGGGTTCAGCTGCTGGGGAAGACTGAGATTACCTTTTTTGAAAAGCTTCC 200
BSNT_05327___ 201 TGAAGAGGAGAAAAAACAGCGAATGGATTCTCTGTGCACTGATGTAACAC 250
.||.|||||.|||||.|||||.|||...||..|.|||||.||..|.||||
BL03401___hpr 201 AGAGGAGGAAAAAAAGCAGCGGATGCTGTCGTTATGCACGGAAATTACAC 250
BSNT_05327___ 251 CAGCTATTATTCTTTCTAGAGATATGCCCATCCCGCAGGAGCTGATTGAC 300
|.|||||.||.|||||..|.|||.||||.||.||||..||.||..|.||.
BL03401___hpr 251 CGGCTATCATCCTTTCCCGTGATTTGCCGATTCCGCCTGAACTCGTGGAG 300
BSNT_05327___ 301 GCATCCGAGAAAAATGGGGTGCCTGTCCTCAGATCGCCGCTGAAAACGAC 350
||||||||..||||.||.||||||||.||..|.||.||..|.||.|||||
BL03401___hpr 301 GCATCCGAAGAAAACGGCGTGCCTGTGCTTCGTTCCCCATTAAAGACGAC 350
BSNT_05327___ 351 AAGACTGTCAAGCCGTTTAACCAACTTCCTTGAGAGCAGGCTGGCGCCTA 400
..|.|||.|.||||||.|.||.||.||.|||||.|||..||||||.||.|
BL03401___hpr 351 GCGCCTGACGAGCCGTCTGACGAATTTTCTTGAAAGCCAGCTGGCTCCGA 400
BSNT_05327___ 401 CCACGGCGATTCATGGCGTTCTTGTCGATATATATGGTGTCGGCGTGCTG 450
|.||.||||||||.|||||.||.|||||..|.||.||.|||||.|||||.
BL03401___hpr 401 CAACTGCGATTCACGGCGTCCTCGTCGACGTTTACGGCGTCGGGGTGCTC 450
BSNT_05327___ 451 ATCACAGGAAAAAGCGGCGTCGGGAAAAGTGAAACAGCGCTGGAGCTTGT 500
||.|..|||||.|||||.||.||.|||||.|||||.||..||||||||||
BL03401___hpr 451 ATTATCGGAAAGAGCGGGGTTGGAAAAAGCGAAACGGCTTTGGAGCTTGT 500
BSNT_05327___ 501 GAAAAGAGGGCATCGCCTTGTTGCCGATGATTGCGTTGAAATACGGCAGG 550
.||||||||.|||||||||||.||.|||||.||||||||.||..|.||||
BL03401___hpr 501 CAAAAGAGGCCATCGCCTTGTGGCGGATGACTGCGTTGAGATCAGACAGG 550
BSNT_05327___ 551 AGGATCAGGATACTCTTG-TGGGAAACGCTCCGGAATTAATTGAGCACCT 599
|.||.|||||||| .||| |.||||.|||.||.||||||||||||||.||
BL03401___hpr 551 AAGACCAGGATAC-ATTGATCGGAAGCGCGCCTGAATTAATTGAGCATCT 599
BSNT_05327___ 600 TCTTGAGATCAGGGGCCTTGGCATTATCAATGTGATGACGCTATTTGGCG 649
.||.||.|||||.||.|||||||||||||||||.||||||.|||||||||
BL03401___hpr 600 CCTGGAAATCAGAGGTCTTGGCATTATCAATGTCATGACGTTATTTGGCG 649
BSNT_05327___ 650 CTGGCGCGGTCAGAAGCAATAAACGAATCACGATTGTCATGAATCTTGAA 699
|.||.||||||||||||..|||||||||.||..|||||||||..||.||.
BL03401___hpr 650 CGGGGGCGGTCAGAAGCTTTAAACGAATTACCCTTGTCATGAGCCTGGAG 699
BSNT_05327___ 700 CTCTGGGAGCAGGGCAAGCAATACGACCGGCTCGGACTTGAGGAAGAGAC 749
||.||||||||.||.|||||.||||||||..|.||.|||||.|||||.||
BL03401___hpr 700 CTTTGGGAGCAAGGAAAGCAGTACGACCGCTTAGGGCTTGAAGAAGAAAC 749
BSNT_05327___ 750 CATGAAAATCATTGATACAGAAATTACAAAACTGACGATTCCCGTCCGCC 799
.||||||||.|||||||||||..||.||||.|||||.|||||.||.||.|
BL03401___hpr 750 AATGAAAATTATTGATACAGACGTTCCAAAGCTGACAATTCCGGTTCGTC 799
BSNT_05327___ 800 CAGGCCGAAATCTTGCAGTCATCATTGAAGTGGCAGCAATGAACTTCAGA 849
|.||..||||.|||||.||||||||.||||||||.|||||||||||||||
BL03401___hpr 800 CGGGAAGAAACCTTGCCGTCATCATCGAAGTGGCCGCAATGAACTTCAGA 849
BSNT_05327___ 850 TTGAAGCGGATGGGGCTGAATGCCGCTGAACAATTTACCAACAAGCTGGC 899
.|||||.|.|||||||||||||||||.||.|||||||||.|.|||||.||
BL03401___hpr 850 CTGAAGAGAATGGGGCTGAATGCCGCGGAGCAATTTACCCATAAGCTTGC 899
BSNT_05327___ 900 GGACGTCATTGAAGACGGTGAACAAGAAGAATAG 933
|||.||.||||||||.|||||.|..|||||||||
BL03401___hpr 900 GGATGTAATTGAAGATGGTGAGCTTGAAGAATAG 933
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