Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05342 and BL03397
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence pep-align/BSNT_05342___yvlB.1.5803.seq
# -bsequence pep-align/BL03397___yvlB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05342___yvlB-BL03397___yvlB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05342___yvlB-BL03397___yvlB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05342___yvlB
# 2: BL03397___yvlB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 263/365 (72.1%)
# Similarity: 306/365 (83.8%)
# Gaps: 1/365 ( 0.3%)
# Score: 1361.0
#
#
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BSNT_05342___ 1 MMQEKERILKLVEEGKLTAQEALTLIEKLDSDYKEKEEKITALSVHVHDE 50
|..||||||||||||||:|:|||.|||||:.||||.|.|:||||..|.|.
BL03397___yvl 1 MKHEKERILKLVEEGKLSAKEALILIEKLEEDYKETESKVTALSEDVIDS 50
BSNT_05342___ 51 EEPFTTAKKESGKPSLGAKLFDWIDSAVKKVKEVDLDLNFGHAYDVQHIF 100
|: |.:.||:..|||:|:|||:|||:|||||||.||||||||:|||||||
BL03397___yvl 51 ED-FYSEKKKEPKPSIGSKLFEWIDTAVKKVKEADLDLNFGHSYDVQHIF 99
BSNT_05342___ 101 QFKDTDFSSVELQIANGSVNIVPWEDDDIRAECQAKVYRADSQDAARHAF 150
||||||||::::|:||||||:|||.|.|||.|||||||||::||.||.||
BL03397___yvl 100 QFKDTDFSTLDIQLANGSVNLVPWSDSDIRVECQAKVYRAENQDEARQAF 149
BSNT_05342___ 151 LQHIECEIKGNKFFIRTEKKTMKTNVTLYIPQKEYDKIRVKLFNGPVRGE 200
||||:|.::|:||.|||||||||||:|:|||.|||.|||.||||||||||
BL03397___yvl 150 LQHIDCGVEGDKFMIRTEKKTMKTNLTVYIPDKEYGKIRFKLFNGPVRGE 199
BSNT_05342___ 201 HLHVKEFSAKTTNGVLSFSHLTAEKAIAETANGQIKLASHSCGTIEAETI 250
||:|||.||||||||||||.|||.||..||||||||||.|:||.||||||
BL03397___yvl 200 HLNVKELSAKTTNGVLSFSALTAGKASLETANGQIKLADHTCGEIEAETI 249
BSNT_05342___ 251 NGLIDLRGKSESIDVQSFNGNIAINVTESDCRSIYAKTTTGSVELAIPDD 300
||||||:|..|::|:||||||||..|....||:.|.|||||||||.:|.|
BL03397___yvl 250 NGLIDLKGSCEALDLQSFNGNIAATVKNPHCRTAYVKTTTGSVELNVPRD 299
BSNT_05342___ 301 LAVKAELKSNLGSLSHELMDVEMLKEKNDTIQKEMMFTSNQAHDQNITVF 350
.||.||||||||||||:|.|.|:|||||:||||||...:||.||.::|||
BL03397___yvl 300 CAVTAELKSNLGSLSHDLSDAEILKEKNETIQKEMYLKANQNHDHSMTVF 349
BSNT_05342___ 351 SESLTGAIKLKYSQR 365
.||.||:|.|.::|.
BL03397___yvl 350 LESKTGSIHLNHTQE 364
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