Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05343 and BL03396

See DNA alignment / Visit BSNT_05343 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:27
# Commandline: needle
#    -asequence pep-align/BSNT_05343___yvlA.1.5803.seq
#    -bsequence pep-align/BL03396___yvlA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05343___yvlA-BL03396___yvlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05343___yvlA-BL03396___yvlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05343___yvlA
# 2: BL03396___yvlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      52/108 (48.1%)
# Similarity:    77/108 (71.3%)
# Gaps:           0/108 ( 0.0%)
# Score: 293.0
# 
#
#=======================================

BSNT_05343___      1 MNRNQAIIASLCYFSVFIAPIIVPIVAYFVVNEKETKRHAIRSLISHIVP     50
                     |.||.|:|:|:||||||.||:|:||.|||:.:::|||:||:|||||||:|
BL03396___yvl      1 MTRNNALISSICYFSVFFAPLILPIAAYFITDDQETKKHAMRSLISHIIP     50

BSNT_05343___     51 FVGWLFLFIALLGGAVAIDGDSLLPVFVIIGGAVIYFLVVIGIIIWNVIQ    100
                     |:..:.|....:.|.:.......|.|..:|||.|.:.::.:.|::|||:|
BL03396___yvl     51 FISVVILAAGAISGTLIFGDGGYLAVIFMIGGFVFFGIISLIIVVWNVVQ    100

BSNT_05343___    101 GIKVLRAA    108
                     |||:|..|
BL03396___yvl    101 GIKMLTQA    108


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