Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00701 and BL03389
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:20
# Commandline: needle
# -asequence pep-align/BSNT_00701___ycsA.1.5803.seq
# -bsequence pep-align/BL03389___ycsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00701___ycsA-BL03389___ycsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00701___ycsA-BL03389___ycsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00701___ycsA
# 2: BL03389___ycsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 253/352 (71.9%)
# Similarity: 297/352 (84.4%)
# Gaps: 0/352 ( 0.0%)
# Score: 1356.0
#
#
#=======================================
BSNT_00701___ 1 MKQFEIAAIPGYGVGKEVVAAAEKVLHTAAEVHGGLSFSFTAFPWSCDYY 50
||.|.||:|||.|||||||.||::||...::|||||||.||.||:||:||
BL03389___ycs 1 MKVFNIASIPGDGVGKEVVPAAQRVLKAVSDVHGGLSFRFTEFPYSCEYY 50
BSNT_00701___ 51 LEHGKMMPEDGIHTLTQFEAVFLGAVGNPKLVPDHISLWGLLLKIRRELE 100
||||:|||:||:..|.:|:::|||||||.|||||||||||||:|||||.|
BL03389___ycs 51 LEHGEMMPDDGLEQLKEFDSIFLGAVGNSKLVPDHISLWGLLIKIRREFE 100
BSNT_00701___ 101 LSINMRPAKQMAGITSPLLHPNDFDFVVIRENSEGEYSEVGGRIHRGDDE 150
..||:||||.:.||.|||.:|.|||.:|:|||||||||.:||||.|.:||
BL03389___ycs 101 QVINIRPAKYLQGIKSPLANPKDFDLLVVRENSEGEYSSIGGRIFRDEDE 150
BSNT_00701___ 151 IAIQNAVFTRKATERVMRFAFELAKKRRSHVTSATKSNGIYHAMPFWDEV 200
||||||||:||..||.||||||||.||:.|||||||||||.::|||||||
BL03389___ycs 151 IAIQNAVFSRKGAERAMRFAFELAAKRKKHVTSATKSNGIVYSMPFWDEV 200
BSNT_00701___ 201 FQQTAADYSGIETSSQHIDALAAFFVTRPETFDVIVASNLFGDILTDISS 250
|:.||.||..|...|||||||:||||||||..||||||||||||||||.:
BL03389___ycs 201 FENTAKDYPDITADSQHIDALSAFFVTRPEKLDVIVASNLFGDILTDIGA 250
BSNT_00701___ 251 SLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAK 300
::|||||:||:||||.:|||||||||||||||||.|:|:|||||||||||
BL03389___ycs 251 AIMGSIGVAPAANINVNGKYPSMFEPVHGSAPDIIGKGIANPIGQIWTAK 300
BSNT_00701___ 301 LMLDHFGEEELGAKILDVMEQVTADGIKTRDIGGQSTTAEVTDEICSRLR 350
:||||||||||||::|||:|.|...|..|.||||.|||.:||:||..|:|
BL03389___ycs 301 MMLDHFGEEELGARLLDVIEDVLKSGYLTPDIGGSSTTDDVTEEIIKRVR 350
BSNT_00701___ 351 KL 352
.:
BL03389___ycs 351 TI 352
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