Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05368 and BL03384

See DNA alignment / Visit BSNT_05368 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:29
# Commandline: needle
#    -asequence pep-align/BSNT_05368___yvjA.1.5803.seq
#    -bsequence pep-align/BL03384___yvjA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05368___yvjA-BL03384___yvjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05368___yvjA-BL03384___yvjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05368___yvjA
# 2: BL03384___yvjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     223/284 (78.5%)
# Similarity:   254/284 (89.4%)
# Gaps:           2/284 ( 0.7%)
# Score: 1151.0
# 
#
#=======================================

BSNT_05368___      1 --MMDVRNKTLWILRDYVYILVGAAITAVSFNVFLLPNKIAAGGVSGIST     48
                       |...|.:...:||||.|||.|:|:.||:||:|||||:|||||||||||
BL03384___yvj      1 MNMDKTRYQLFTVLRDYGYILFGSAVVAVTFNMFLLPNRIAAGGVSGIST     50

BSNT_05368___     49 ILQSYGFEAAYVQWIINIPLFIAGVILLGGKFGLKTLAGSVFLPLVVFLT     98
                     ||||:|||||||||..|||||||||::||||||:|||.||||||.||::|
BL03384___yvj     51 ILQSFGFEAAYVQWAFNIPLFIAGVLVLGGKFGIKTLVGSVFLPFVVYVT    100

BSNT_05368___     99 RDIQPATHHELLAAIFGGVGIGIGIGIVYLGKGSTGGTALAAQIIHKYSG    148
                     |||.|||.:.||||||||||||:|||:|:||:||||||||||||||||:|
BL03384___yvj    101 RDIAPATENPLLAAIFGGVGIGVGIGMVFLGRGSTGGTALAAQIIHKYTG    150

BSNT_05368___    149 LSLGKCLAIIDGMIVVTAMIVFNIEQGLYAMLGVYVSSKTIDVVQVGFNR    198
                     ||.|||||:|||.||::||.|||||||||||||||:|||||||:|||.||
BL03384___yvj    151 LSQGKCLALIDGTIVLSAMFVFNIEQGLYAMLGVYISSKTIDVIQVGLNR    200

BSNT_05368___    199 SKMALIITKQEQAVKEAVLQKIDRGVTKISAVGGYTDDDRPILMCVVGQT    248
                     ||||:|||.:|:.|:.|||.|||||:||||||||||||:|||||||||||
BL03384___yvj    201 SKMAMIITNREEEVRHAVLNKIDRGITKISAVGGYTDDERPILMCVVGQT    250

BSNT_05368___    249 EFTKLKQIVKQIDESAFVIVADASEVLGEGFKRA    282
                     |||||||:||.||||||||..|||||||||||||
BL03384___yvj    251 EFTKLKQLVKHIDESAFVIAMDASEVLGEGFKRA    284


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.