Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05378 and BL03375

See DNA alignment / Visit BSNT_05378 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence pep-align/BSNT_05378.1.5803.seq
#    -bsequence pep-align/BL03375___yvyC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05378-BL03375___yvyC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05378-BL03375___yvyC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05378
# 2: BL03375___yvyC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      44/113 (38.9%)
# Similarity:    52/113 (46.0%)
# Gaps:          50/113 (44.2%)
# Score: 244.0
# 
#
#=======================================

BSNT_05378         0 --------------------------------------------------      0
                                                                       
BL03375___yvy      1 MSINRLSSLEPIIDAYKTQMLNKQYEAVERPQQTDAAEFTFAQLEKTIQG     50

BSNT_05378         1 MNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAA     50
                     .|.|||||||||:|.||:||.||||||:::.|.||:||||||.|||||||
BL03375___yvy     51 ANNLLEPSQVHLQFVLHEKLGEYYVKVVDNRTEEVVREIPPKEWLDFYAA    100

BSNT_05378        51 MTEFLGLFVDEKK     63
                     |.||:||.||:..
BL03375___yvy    101 MAEFMGLIVDKTT    113


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