Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05389 and BL03365

See DNA alignment / Visit BSNT_05389 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:31
# Commandline: needle
#    -asequence pep-align/BSNT_05389___comFC.1.5803.seq
#    -bsequence pep-align/BL03365___comFC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05389___comFC-BL03365___comFC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05389___comFC-BL03365___comFC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05389___comFC
# 2: BL03365___comFC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     124/246 (50.4%)
# Similarity:   159/246 (64.6%)
# Gaps:           8/246 ( 3.3%)
# Score: 640.5
# 
#
#=======================================

BSNT_05389___      1 ------MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCR     44
                           .:.|.||  :||.||:|.:.....::|.:.|.|:.:||:|..|:
BL03365___com      1 MKTRFAQAIEEGG--NKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECK     48

BSNT_05389___     45 SKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRDSLLLRQNRSVYTYN     94
                     ....:|.|.:||.|||||....:|.||..|........|||||||||.||
BL03365___com     49 ENFIEIKGTVCPKCGRPQGSEELCGDCAKWEANPLTRSLLRQNRSVYLYN     98

BSNT_05389___     95 DMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKER    144
                     ..|||.|:|||||||||::.||...|.|.|.:.:.....||||||||:||
BL03365___com     99 TFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEER    148

BSNT_05389___    145 EEERGFNQAQLLAECLDRPSHHPLIRLNNEKQSKKKKTERLLSERIFDTK    194
                     :.|||||||:.||..|..|..|||||:.|||||||.:.||:..:.:|.|:
BL03365___com    149 KAERGFNQAERLASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTE    198

BSNT_05389___    195 NNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS    240
                     ..|.:.:::||||||||||||||.||.||:..|:|.||||:|||||
BL03365___com    199 KGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYTLIRS    244


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