Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05393 and BL03362

See DNA alignment / Visit BSNT_05393 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:32
# Commandline: needle
#    -asequence pep-align/BSNT_05393___yviA.1.5803.seq
#    -bsequence pep-align/BL03362___degV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05393___yviA-BL03362___degV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05393___yviA-BL03362___degV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05393___yviA
# 2: BL03362___degV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     198/281 (70.5%)
# Similarity:   242/281 (86.1%)
# Gaps:           1/281 ( 0.4%)
# Score: 1062.0
# 
#
#=======================================

BSNT_05393___      1 MNIAVVTDSTAYIPKEIREQHQIHMIPLQVVFREETYREEIELDWKSFYE     50
                     |..||||||||||||::|:::.||||||.|:|.|.:|||||::.||.:|:
BL03362___deg      1 MKTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYK     50

BSNT_05393___     51 EVKKHNELPTTSQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAA    100
                     |||.|..|||||||..|||::|||:||::|||||||||||||||||:||.
BL03362___deg     51 EVKAHENLPTTSQPAYGELISLYEKLGETYDAVISIHLSSGISGTFNSAV    100

BSNT_05393___    101 AADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEE    150
                     :|..|::.|.||||||||||:||||||::|||:.:.|| :||:||:.|:.
BL03362___deg    101 SASGMLEGIKVYPFDSEISCMAQGFYAIEAAEMAEKGA-APEEIIRHLDH    149

BSNT_05393___    151 MKKTVRAYFMVDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVPF    200
                     ||.::|||||||||:|||||||||.||||:||||||||||||:||:|||:
BL03362___deg    150 MKTSMRAYFMVDDLSHLQRGGRLSGAQAFVGSLLKVKPILHFENKLIVPY    199

BSNT_05393___    201 EKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEAAKIIEELSAK    250
                     |||||||||::|::||..|||.||.|:||.||||||||||.:||||||.:
BL03362___deg    200 EKIRTRKKAMNRLFELFGEDAEKGKPLRAVVIHANREEEADQIIEELSKQ    249

BSNT_05393___    251 YPHVEFYNSYFGAVIGTHLGEGALGICWCFK    281
                     |.|||||.||||.||||||||||:||.|...
BL03362___deg    250 YAHVEFYKSYFGPVIGTHLGEGAMGIAWYTV    280


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