Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01936 and BL03345
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_01936.1.5803.seq
# -bsequence pep-align/BL03345___yjbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01936-BL03345___yjbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01936-BL03345___yjbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01936
# 2: BL03345___yjbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 137/250 (54.8%)
# Similarity: 161/250 (64.4%)
# Gaps: 39/250 (15.6%)
# Score: 588.0
#
#
#=======================================
BSNT_01936 1 MNVTNWAALLQLQALQSISNARSSSDTQNTESPLSSFSSLLSQY---TNG 47
|||.:.||||:|||::|...|..| .:|.....|||:|:|| ..|
BL03345___yjb 1 MNVNHLAALLELQAIRSFYPASDS----GSEDAGFDFSSILNQYLSNVGG 46
BSNT_01936 48 LTSQQSALSSSPSPLSMLNSANTTAPSLLSAYGLNSYTSSNSSSVTKAAE 97
|.|.|.|::.:.|..|.|. || .|||
BL03345___yjb 47 LESSQPAVAPTVSTASQLQ-----AP--------------------LAAE 71
BSNT_01936 98 STET-AAADSASNKHEANQISSG--DFSIDSAIKKAADKYGVDEKLIRAV 144
..|. ||..||: |..:|.| :.:||..||.||:|||||||||.||
BL03345___yjb 72 KPEAIAAVPSAA----AKPVSFGGQNQNIDQIIKNAAEKYGVDEKLIHAV 117
BSNT_01936 145 IKQESGFNAKAVSGAGAMGLMQLMPSTASSLGVSNPLDPQQNVEGGTKYL 194
:||||.:..||||.||||||||||||||.:|||:|..||.||:|||||||
BL03345___yjb 118 VKQESRYQEKAVSPAGAMGLMQLMPSTAKALGVNNAFDPVQNIEGGTKYL 167
BSNT_01936 195 KQMLDKYGGNVSMALAAYNAGPGNVDRYGGIPPFQETKNYVKKITSAYYA 244
|||||||.|||.:||||||||||||.:|||||||:||:||||||||.|||
BL03345___yjb 168 KQMLDKYSGNVKLALAAYNAGPGNVQKYGGIPPFKETQNYVKKITSNYYA 217
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