Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01936 and BL03345
See
Amino acid alignment /
Visit
BSNT_01936 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01936.1.5803.seq
# -bsequence dna-align/BL03345___yjbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01936-BL03345___yjbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01936-BL03345___yjbJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01936
# 2: BL03345___yjbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 781
# Identity: 488/781 (62.5%)
# Similarity: 488/781 (62.5%)
# Gaps: 173/781 (22.2%)
# Score: 1427.0
#
#
#=======================================
BSNT_01936 1 GTGAATGT-AACGAATTGGGCAGCTTTACTT-CAGCTTCAGGCACTACAG 48
.||||.|| ||| .|||.|||.|||.| ||| .|.||||||||..|||.|
BL03345___yjb 1 ATGAACGTCAAC-CATTTGGCCGCTCT-CTTGGAACTTCAGGCGATACGG 48
BSNT_01936 49 TC--CATATC-----TAATGCACGCAGCAGCTCGGACACTCAGAATACGG 91
|| ..|||| | ||..||||.|.||.|| || ||.|||
BL03345___yjb 49 TCGTTTTATCCGGCTT----CAGACAGCGGTTCCGA-----AG-ATGCGG 88
BSNT_01936 92 AAAGCCCGCTTTCAAGTTTTAGCTC--TTTGCTCAGCCAATATACAAACG 139
|.|||.| |||.||||| ||| |.|.|||||
BL03345___yjb 89 -------GTTTTGA--TTTCAGCTCGATTT--TAAACCAAT--------- 118
BSNT_01936 140 GTCTGACATCTCAGCAA--TCAGC-ACTT----TCTTCATCGCCAAGCCC 182
||.|.||||| ||.|| .||| |||||| .|||||
BL03345___yjb 119 -------ATTTAAGCAATGTCGGCGGCTTGGAGTCTTCA-----CAGCCC 156
BSNT_01936 183 GCTCAGCATGCTGAACAGCGCGAAT---ACAACAGCGCCGTCACTGCTTT 229
|| |..|||| .|||.| .|.|||| ||||.|.|| ||
BL03345___yjb 157 GC---GGTTGCT-------CCGACTGTGTCGACAG---CGTCTCAGC-TT 192
BSNT_01936 230 CAG----CGTATGG--GCTTAA----CTCATATACGAGCAGCAATTCAAG 269
||| || .||| |||.|| || ||| ||||||...|
BL03345___yjb 193 CAGGCCCCG-CTGGCAGCTGAAAAGCCT-------GAG--GCAATTGCGG 232
BSNT_01936 270 TTCAGTCACAAAAGCGGCAGAAAGCACTGAAACAGCTG---CTGCAGATT 316
|.|||.||...||.|||| .||||| |.| || ||
BL03345___yjb 233 --CCGTCCCATCTGCCGCAG-------CGAAAC--CCGTCTCT-----TT 266
BSNT_01936 317 CAGCTTCAAACAAACATGAAGCAAATCAGATCAGTTCGGGAGACTTCTCT 366
|.||..|.| ||||||||.|
BL03345___yjb 267 CGGCGGCCA-------------AAATCAGAAC------------------ 285
BSNT_01936 367 ATTGA-CAGTGCGATTAAAAAAGCCGCTGATAAATATGGCGTTGATGAAA 415
||||| |||..| ||.|||||.|||||.||.|||||.||.||.|||||.|
BL03345___yjb 286 ATTGACCAGATC-ATCAAAAACGCCGCAGAAAAATACGGGGTCGATGAGA 334
BSNT_01936 416 AACTGATCCGTGCCGTCATCAAACAGGAATCAGGCTTTAATGCAAAAGCG 465
|||||||.|.|||||||.||||.|||||||||.|||.|.|.|..||||||
BL03345___yjb 335 AACTGATTCATGCCGTCGTCAAGCAGGAATCACGCTATCAAGAGAAAGCG 384
BSNT_01936 466 GTCAGCGGAGCAGGTGCGATGGGCCTCATGCAGCTGATGCCGTCAACAGC 515
||||||...||.||.||.||||||||.||||||||.||||||||.||.||
BL03345___yjb 385 GTCAGCCCGGCCGGCGCCATGGGCCTGATGCAGCTCATGCCGTCCACGGC 434
BSNT_01936 516 -AAGCTCACTTGGCGTTTCCAAT-CCGC--TTGATCCGCAGCAAAATGTG 561
||| .|.||.||||| .||| .||| ||||.||....||||||.|.
BL03345___yjb 435 GAAG-GCGCTCGGCGT---GAATAACGCTTTTGACCCCGTTCAAAATATA 480
BSNT_01936 562 GAGGGCGGAACGAAATATTTAAAACAAATGCTGGATAAATACGGCGGCAA 611
||.||||||||.|||||.|||||.||.|||||.|||||||||.||||.||
BL03345___yjb 481 GAAGGCGGAACAAAATACTTAAAGCAGATGCTCGATAAATACAGCGGAAA 530
BSNT_01936 612 TGTG----TCTATGGCATTAGCGGCTTACAACGCCGGACCGGGGAATGTT 657
|||| || |||||||||||.|||||.|||||||||||.|||||
BL03345___yjb 531 TGTGAAGCTC----GCATTAGCGGCATACAATGCCGGACCGGGAAATGT- 575
BSNT_01936 658 GACCGA---TACGGAGGCATTCCTCCTTTCCAAGAAACGAAAAACTATGT 704
||.| ||||||||||||||.|||||..||||||||.||||.|||||
BL03345___yjb 576 --CCAAAAGTACGGAGGCATTCCCCCTTTTAAAGAAACGCAAAATTATGT 623
BSNT_01936 705 AAAAAAAATAACTTCAGCTTATTACGCGTAA 735
|||||||||.||.|||..|||.|||||.|||
BL03345___yjb 624 AAAAAAAATCACCTCAAATTACTACGCTTAA 654
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.