Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01933 and BL03343

See DNA alignment / Visit BSNT_01933 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence pep-align/BSNT_01933___yjbH.1.5803.seq
#    -bsequence pep-align/BL03343___yjbH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01933___yjbH-BL03343___yjbH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01933___yjbH-BL03343___yjbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01933___yjbH
# 2: BL03343___yjbH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     220/303 (72.6%)
# Similarity:   263/303 (86.8%)
# Gaps:           7/303 ( 2.3%)
# Score: 1144.5
# 
#
#=======================================

BSNT_01933___      1 MTNYQHELYFAHCHGHPKKPLEIYMFVDPLCPECWSLEPVIKKLKIRYGR     50
                     ||..|.:.:|:||||||:||:|||||||||.||||:|||.||||||||||
BL03343___yjb      1 MTLNQRDQFFSHCHGHPQKPMEIYMFVDPLSPECWALEPAIKKLKIRYGR     50

BSNT_01933___     51 FFTLRIIASASLTALN-KKRKKHLLAEAWEKIASRSGMSCDGNVWFEQDQ     99
                     ||||||||:.|:|||| :||||..|||||||||.||||||||.:.  .|:
BL03343___yjb     51 FFTLRIIAACSITALNVQKRKKRRLAEAWEKIACRSGMSCDGTLL--HDK     98

BSNT_01933___    100 PLSSPYMAALAFKAAELQGRKAGMQFLRNMQESLFVSKKNITDENVLLEI    149
                     .||:||:|:||.|||||||||||:||||.||||||:::::||:|.|||.|
BL03343___yjb     99 ALSAPYLASLALKAAELQGRKAGLQFLRCMQESLFLNQQDITEEQVLLAI    148

BSNT_01933___    150 AENTSLDLEEFKKDLHSQSAVKALQCDMKIAAEMDVSVNPTLTFFNTQHE    199
                     ||:|.|||||||:||||||||||||||:||||||:|:..|||||||:..|
BL03343___yjb    149 AEHTQLDLEEFKRDLHSQSAVKALQCDLKIAAEMEVASVPTLTFFNSLRE    198

BSNT_01933___    200 DEGLKVPGSYSYDVYEEILFEMLGDEPKPSETPPLECFIEYFRFVASKEI    249
                     .|||||.|:|||::|||:||||||||||||:|||||.|||||:|||.|||
BL03343___yjb    199 GEGLKVTGNYSYEIYEEVLFEMLGDEPKPSQTPPLELFIEYFQFVADKEI    248

BSNT_01933___    250 ALVYDLSLEEVEKEMKKLAFAKKVAKVEAKHGMFWKSLSTYSDE---YQS    296
                     |:|||.:||:||:||||||||:||.:|||||||||:.::.:.|.   || 
BL03343___yjb    249 AVVYDWTLEQVEREMKKLAFARKVERVEAKHGMFWRYINEHHDAGPLYQ-    297

BSNT_01933___    297 CEK    299
                     |||
BL03343___yjb    298 CEK    300


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