Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01911 and BL03339
See
DNA alignment /
Visit
BSNT_01911 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence pep-align/BSNT_01911___trpS.1.5803.seq
# -bsequence pep-align/BL03339___trpS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01911___trpS-BL03339___trpS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01911___trpS-BL03339___trpS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01911___trpS
# 2: BL03339___trpS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 305/345 (88.4%)
# Similarity: 320/345 (92.8%)
# Gaps: 15/345 ( 4.3%)
# Score: 1574.0
#
#
#=======================================
BSNT_01911___ 1 MSLFYYVLRNEVDVFMKQTIFSGIQPSGSVTLGNYIGAMKQFVELQHDYN 50
||:|||||||||||||||||||||||||:||.|||
BL03339___trp 1 ---------------MKKTIFSGIQPSGSVTLGNYIGAMKQFVDLQDDYN 35
BSNT_01911___ 51 SYFCIVDQHAITVPQDRLELRKNIRNLAALYLAVGLDPEKATLFIQSEVP 100
.|||||||||||||||||.||||||||||||||:||||:|||||||||||
BL03339___trp 36 CYFCIVDQHAITVPQDRLALRKNIRNLAALYLAIGLDPKKATLFIQSEVP 85
BSNT_01911___ 101 AHAQAGWMMQCVAYIGELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL 150
||||||||:||||||||||||||:||||.|.|||||||||||||||||||
BL03339___trp 86 AHAQAGWMLQCVAYIGELERMTQYKDKSAGKEAVVSGLLTYPPLMAADIL 135
BSNT_01911___ 151 LYGTDLVPVGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPKVGARIM 200
|||||:||||||||||||||||||||||||||||||:|||||||||||||
BL03339___trp 136 LYGTDVVPVGEDQKQHLELTRNLAERFNKKYNDIFTVPEVKIPKVGARIM 185
BSNT_01911___ 201 SLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDKEN 250
||.|||||||||||||||:|||||||||||||||||||||:||||:||||
BL03339___trp 186 SLADPLKKMSKSDPNQKAFITLLDEPKQLEKKIKSAVTDSDGIVKYDKEN 235
BSNT_01911___ 251 KPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQ 300
|||||||||||||||..:|||||||||||||||||.||||||:.||||||
BL03339___trp 236 KPGVSNLLTIYSILGQASIEELEAKYEGKGYGEFKSDLAEVVIGALKPIQ 285
BSNT_01911___ 301 DRYYELIESEELDRILDEGAERANRTANKMLKKMENAMGLGRKRR 345
|||:||||||||||||||||||||:||||||||||||||||||||
BL03339___trp 286 DRYHELIESEELDRILDEGAERANQTANKMLKKMENAMGLGRKRR 330
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.