Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01911 and BL03339
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_01911___trpS.1.5803.seq
# -bsequence dna-align/BL03339___trpS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01911___trpS-BL03339___trpS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01911___trpS-BL03339___trpS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01911___trpS
# 2: BL03339___trpS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1044
# Identity: 781/1044 (74.8%)
# Similarity: 781/1044 (74.8%)
# Gaps: 57/1044 ( 5.5%)
# Score: 3018.0
#
#
#=======================================
BSNT_01911___ 1 ATGAGCCTTTTTTATTATGTTTTAAGAAATGAGGTTGATGTTTTCATGAA 50
|||||
BL03339___trp 1 ---------------------------------------------ATGAA 5
BSNT_01911___ 51 ACAAACGATTTTTTCAGGCATTCAGCCAAGCGGCTCAGTGACGCTTGGCA 100
|.|||||||||||||.||.||.|||||.||||||||.||.||.||.||||
BL03339___trp 6 AAAAACGATTTTTTCCGGTATCCAGCCGAGCGGCTCTGTCACCCTCGGCA 55
BSNT_01911___ 101 ACTATATCGGTGCAATGAAGCAGTTTGTCGAACTGCAGCATGATTATAAC 150
||||||||||.||.|||||||||||||||||..|||||.||||.||.|||
BL03339___trp 56 ACTATATCGGAGCGATGAAGCAGTTTGTCGACTTGCAGGATGACTACAAC 105
BSNT_01911___ 151 AGCTATTTTTGCATCGTGGACCAGCATGCGATAACTGTTCCTCAAGACCG 200
.|.||.||.||||||||.||.|||||.|||||.||.||.||.||.|||||
BL03339___trp 106 TGTTACTTCTGCATCGTCGATCAGCACGCGATCACAGTACCGCAGGACCG 155
BSNT_01911___ 201 GCTTGAGCTTAGAAAGAATATCCGCAATCTCGCGGCGCTTTACTTAGCTG 250
|||.|.|||.||||||||.|||||.||.||.||.|||||.||.||.||..
BL03339___trp 156 GCTCGCGCTGAGAAAGAACATCCGGAACCTTGCCGCGCTGTATTTGGCGA 205
BSNT_01911___ 251 TCGGACTTGATCCAGAAAAAGCAACATTGTTTATTCAGTCAGAGGTCCCC 300
||||.||.|||||..|||||||.||..|||||||.||.||.||.||.||.
BL03339___trp 206 TCGGCCTCGATCCGAAAAAAGCGACGCTGTTTATCCAATCGGAAGTGCCT 255
BSNT_01911___ 301 GCGCATGCGCAGGCCGGATGGATGATGCAGTGTGTCGCTTATATCGGCGA 350
||.||.||.|||||.|||||||||.|.|||||||||||.||.||||||||
BL03339___trp 256 GCACACGCCCAGGCGGGATGGATGCTTCAGTGTGTCGCCTACATCGGCGA 305
BSNT_01911___ 351 GCTTGAGCGGATGACTCAATTTAAGGACAAATCCAAAGGCAATGAAGCTG 400
|||||||||.|||||.||.|..||.||.|||||....||.||.|||||||
BL03339___trp 306 GCTTGAGCGCATGACGCAGTACAAAGATAAATCAGCCGGAAAAGAAGCTG 355
BSNT_01911___ 401 TCGTCTCCGGCCTGTTAACATATCCGCCGCTGATGGCCGCTGATATTCTG 450
||||||||||.||.||.||||||||.||..|.|||||.||.||.||||||
BL03339___trp 356 TCGTCTCCGGGCTTTTGACATATCCTCCATTAATGGCTGCGGACATTCTG 405
BSNT_01911___ 451 CTGTACGGAACGGATCTTGTGCCTGTCGGCGAGGATCAAAAGCAGCACCT 500
||.||.|||||.||..|.||.||||||||.||.|||||.||||||||.||
BL03339___trp 406 CTTTATGGAACAGACGTCGTCCCTGTCGGAGAAGATCAGAAGCAGCATCT 455
BSNT_01911___ 501 TGAGCTGACGCGGAATCTT-GCAGAACGCTTCAACAAAAAATACAACGAC 549
|||..|.||.||||| ||| ||.||.||.|||||.||.|||||.||.|||
BL03339___trp 456 TGAATTAACCCGGAA-CTTGGCGGAGCGTTTCAATAAGAAATATAATGAC 504
BSNT_01911___ 550 ATCTTTACGATTCCGGAAGTGAAAATTCCAAAAGTCGGTGCACGCATCAT 599
||.||||||.|||||||.||.|||||.||.||.|||||.||.|||||.||
BL03339___trp 505 ATTTTTACGGTTCCGGAGGTTAAAATACCGAAGGTCGGCGCCCGCATTAT 554
BSNT_01911___ 600 GTCTCTGAATGATCCGCTGAAGAAAATGAGCAAATCTGATCCGAATCAGA 649
|||.||....||.|||||.||.||.|||||||||||.||||||||.||.|
BL03339___trp 555 GTCACTTGCCGACCCGCTCAAAAAGATGAGCAAATCAGATCCGAACCAAA 604
BSNT_01911___ 650 AAGCTTATATTACATTGCTGGATGAGCCGAAGCAGCTTGAAAAGAAAATC 699
||||.|..||.||..||||.||.||.||.||.||||||||.||.||||||
BL03339___trp 605 AAGCGTTCATCACCCTGCTCGACGAACCAAAACAGCTTGAGAAAAAAATC 654
BSNT_01911___ 700 AAAAGCGCTGTAACTGATTCTGAAGGCATTGTCAAATTTGATAAGGAAAA 749
|||||||||||.||.|||||.||.||.||.|||||||.||||||.|||||
BL03339___trp 655 AAAAGCGCTGTCACGGATTCCGACGGAATCGTCAAATATGATAAAGAAAA 704
BSNT_01911___ 750 CAAACCGGGCGTTTCAAACCTTCTTACAATTTATTCAATTCTCGG-CAAT 798
||||||.||.||.||.||||||||.||.||.|||||.|||||||| |||
BL03339___trp 705 CAAACCCGGTGTATCCAACCTTCTGACGATCTATTCGATTCTCGGACAA- 753
BSNT_01911___ 799 ACGACAATTGAAGAGCTTGAAGCAAAGTACGAAGGAAAAGGCTACGGCGA 848
.|..||||.|||||||||||||||||.||||||||.||||||||||||||
BL03339___trp 754 GCCTCAATCGAAGAGCTTGAAGCAAAATACGAAGGCAAAGGCTACGGCGA 803
BSNT_01911___ 849 GTTTAAAGGTGATTTGGCAGAAGTCGT----GGTGAACGCATTAAAACCG 894
.||||||...||..|.||.|||||||| || |||..|.||||||
BL03339___trp 804 ATTTAAATCAGACCTTGCCGAAGTCGTCATCGG----CGCGCTGAAACCG 849
BSNT_01911___ 895 ATCCAGGACCGCTATTACGAGCTGATAGAATCTGAGGAATTAGACCGGAT 944
||.||.|||||.||..||||..||||.||||||||.||..|.||||||||
BL03339___trp 850 ATTCAAGACCGTTACCACGAATTGATCGAATCTGAAGAGCTGGACCGGAT 899
BSNT_01911___ 945 TCTTGATGAAGGCGCGGAACGGGCGAACCGGACAGCAAACAAAATGCTGA 994
|.|.||.||||||||.|||||.||.||.|..|||||||||||.|||||.|
BL03339___trp 900 TTTGGACGAAGGCGCCGAACGCGCAAATCAAACAGCAAACAAGATGCTAA 949
BSNT_01911___ 995 AAAAAATGGAGAATGCCATGGGTCTTGGAAGAAAAAGACGCTAA 1038
||||||||||.||.||.|||||.||.||..||||||||||||.|
BL03339___trp 950 AAAAAATGGAAAACGCGATGGGACTCGGCCGAAAAAGACGCTGA 993
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