Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01929 and BL03336

See DNA alignment / Visit BSNT_01929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence pep-align/BSNT_01929___yjbF.1.5803.seq
#    -bsequence pep-align/BL03336___yjbF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01929___yjbF-BL03336___yjbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01929___yjbF-BL03336___yjbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01929___yjbF
# 2: BL03336___yjbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity:     162/393 (41.2%)
# Similarity:   229/393 (58.3%)
# Gaps:          21/393 ( 5.3%)
# Score: 760.5
# 
#
#=======================================

BSNT_01929___      1 MFSAVTEDGQMFHLLGAQQNQKLKRRR----FFCPVCGGELAVKLGLQKA     46
                     ||||:.:.|....|....:.:.|||.|    |:||||..||.:|:|..|.
BL03336___yjb      1 MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKL     50

BSNT_01929___     47 PHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEPYIRTIN     96
                     ||||||.:.:|.:..||||.|||:|||.||.||..|...|:||||::.|.
BL03336___yjb     51 PHFAHKPDAACPVPHEPESPYHLKGKRLLYEWLGRQGLRPVLEPYLQEIR    100

BSNT_01929___     97 QRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSR    146
                     ||||::.......:|||:|||.:....::||||||.:.||.|.||:|.:|
BL03336___yjb    101 QRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNR    150

BSNT_01929___    147 LKRTASSFYQLSAFHWQFINAS---PYRELICYCPERRSFLRLSHIIPFY    193
                     :||.....:|||.||||||..|   |  :|:.:|||:::|:.|.|:|||.
BL03336___yjb    151 IKRLTGDLFQLSRFHWQFIQKSDKPP--KLLFFCPEQKAFIILEHLIPFQ    198

BSNT_01929___    194 TNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFN    243
                     ||.:.:|::.:|:..|...::...|.:..:|..||.|.|..||....||.
BL03336___yjb    199 TNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSFRMSAVRFL    248

BSNT_01929___    244 SKEINRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLF    293
                     |||..::..||||..|....|.|:|.|:||..|.:|..||:||||:|:||
BL03336___yjb    249 SKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLF    298

BSNT_01929___    294 MTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSEECLSEAVKQYIDF    343
                     :|    |....|..:.|......|..|.:.||:. ..:..::||.:||.|
BL03336___yjb    299 IT----KHDTFRLQSALHYMDWLIKGKRLKLRWS-GRQTAADAVGEYICF    343

BSNT_01929___    344 LCKKGFLRETQKEVYVLNQPAGGI---HSMQDLIERDRSCFIE    383
                     |.|||||  .:||.:..:  ||..   ..::.|::||...|.|
BL03336___yjb    344 LHKKGFL--VRKEEFYYS--AGSFVPEPRLEALLKRDEHYFSE    382


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