Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01926 and BL03330

See DNA alignment / Visit BSNT_01926 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence pep-align/BSNT_01926___mecA.1.5803.seq
#    -bsequence pep-align/BL03330___mecA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01926___mecA-BL03330___mecA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01926___mecA-BL03330___mecA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01926___mecA
# 2: BL03330___mecA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity:     179/218 (82.1%)
# Similarity:   197/218 (90.4%)
# Gaps:           6/218 ( 2.8%)
# Score: 927.0
# 
#
#=======================================

BSNT_01926___      1 MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHE     50
                     ||||||||||||||:||||||||||||||||||||||||||||:||||||
BL03330___mec      1 MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEMMDEVHE     50

BSNT_01926___     51 EEEFAVEGPLWIQVQALDKGLEIIVTKAQLSKDGQKLELPIPEDKKQEPA    100
                     ||||||||||||||||||||||||||:||||||||||||||||||||..|
BL03330___mec     51 EEEFAVEGPLWIQVQALDKGLEIIVTRAQLSKDGQKLELPIPEDKKQHVA    100

BSNT_01926___    101 SEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGS    150
                     .|.||||||||||||||     :||||||||:|.||||:|||||::|:|.
BL03330___mec    101 EESLDALLDDFQKEEQA-----EEQKLQFVLKFDDFEDLISLSKMSVSGC    145

BSNT_01926___    151 KTTLYSFENRYYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYG    200
                     :|||||.||||||:|||..:.|||||||||||||||:||.::||.|:|||
BL03330___mec    146 QTTLYSHENRYYLFVDFNELPDEEVENQLSILLEYASESKMTIHMLKEYG    195

BSNT_01926___    201 KLIISEHALEAIKKHFAS    218
                     |||.::|||..|||||| 
BL03330___mec    196 KLIAADHALHTIKKHFA-    212


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.