Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01918 and BL03327

See DNA alignment / Visit BSNT_01918 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence pep-align/BSNT_01918___oppF.1.5803.seq
#    -bsequence pep-align/BL03327___oppF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01918___oppF-BL03327___oppF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01918___oppF-BL03327___oppF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01918___oppF
# 2: BL03327___oppF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     270/307 (87.9%)
# Similarity:   285/307 (92.8%)
# Gaps:           2/307 ( 0.7%)
# Score: 1401.0
# 
#
#=======================================

BSNT_01918___      1 MTEKLLEIKHLKQHFVTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKST     50
                     |.|||||||:|||||.||:|.|||||.:||||||||||||||||||||||
BL03327___opp      1 MAEKLLEIKNLKQHFSTPKGIVKAVDGISFDIYKGETLGLVGESGCGKST     50

BSNT_01918___     51 TGRSIIRLYEATDGEVLFNGENVHGRKSRKKLLEFNRKMQMIFQDPYASL    100
                     |||||||||:||.|||||.|:|||.:||.|.|||||||||||||||||||
BL03327___opp     51 TGRSIIRLYQATSGEVLFKGKNVHDKKSAKDLLEFNRKMQMIFQDPYASL    100

BSNT_01918___    101 NPRMTVADIIAEGLDIHKLAKTKKERMQRVHELLETVGLNKEHANRYPHE    150
                     |||||||||||||:|||.||||||||::||||||..||||||||||||||
BL03327___opp    101 NPRMTVADIIAEGIDIHGLAKTKKERLERVHELLNLVGLNKEHANRYPHE    150

BSNT_01918___    151 FSGGQRQRIGIARALAVDPEFIIADEPISALDVSIQAQVVNLMKELQKEK    200
                     |||||||||||||||||:||||||||||||||||||||||||||:||||:
BL03327___opp    151 FSGGQRQRIGIARALAVEPEFIIADEPISALDVSIQAQVVNLMKDLQKER    200

BSNT_01918___    201 GLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPADELYENPLHPYTKSL    250
                     |||||||||||||||||||||||||||||||||||||||||||||||:||
BL03327___opp    201 GLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPADELYENPLHPYTQSL    250

BSNT_01918___    251 LSAIPLPDPDYERNRVRQKYDPSVHQLKDGETMEFREVKPGHFVMCTEAE    300
                     |||||||||||||.|||:.|||||||||..|.||.|||||||||||||.|
BL03327___opp    251 LSAIPLPDPDYERTRVRKTYDPSVHQLKGDEQMELREVKPGHFVMCTEEE    300

BSNT_01918___    301 FKAFS--    305
                     |||:.  
BL03327___opp    301 FKAYQSK    307


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