Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01917 and BL03326
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence pep-align/BSNT_01917___oppD.1.5803.seq
# -bsequence pep-align/BL03326___oppD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01917___oppD-BL03326___oppD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01917___oppD-BL03326___oppD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01917___oppD
# 2: BL03326___oppD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 355
# Identity: 315/355 (88.7%)
# Similarity: 339/355 (95.5%)
# Gaps: 0/355 ( 0.0%)
# Score: 1650.0
#
#
#=======================================
BSNT_01917___ 1 MTRLLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVT 50
|..||||||||||||||.||||||||||||:|||||||||||||||||||
BL03326___opp 1 MKHLLEVKDLAISFKTYAGEVQAIRGVNFHVDKGETLAIVGESGSGKSVT 50
BSNT_01917___ 51 SQAIMKLIPMPPGYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDP 100
||||||||||||||||.|:|||:|:||||.:|||||::||||||||||||
BL03326___opp 51 SQAIMKLIPMPPGYFKNGQILFDGQDLVPKTEKEMQSIRGKEIGMIFQDP 100
BSNT_01917___ 101 MTSLNPTMKVGKQITEVLFKHEKISKEAAKKRAVELLELVGIPMPEKRVN 150
|||||||||||:|||||||||||||||.|.|||||||.||||||||:|||
BL03326___opp 101 MTSLNPTMKVGRQITEVLFKHEKISKEEANKRAVELLSLVGIPMPERRVN 150
BSNT_01917___ 151 QFPHEFSGGMRQRVVIAMALAANPKLLIADEPTTALDVTIQAQILELMKD 200
|:||||||||||||||||||||||||||||||||||||||||||||||||
BL03326___opp 151 QYPHEFSGGMRQRVVIAMALAANPKLLIADEPTTALDVTIQAQILELMKD 200
BSNT_01917___ 201 LQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDEIFYDPRHP 250
|||||:||||||||||||||||||||||||||||||.||||||||:|:||
BL03326___opp 201 LQKKIETSIIFITHDLGVVANVADRVAVMYAGQIVEIGTVDEIFYNPKHP 250
BSNT_01917___ 251 YTWGLLASMPTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSPYAMKID 300
||||||||||:|::.|:|||.||||:||||||||||||||||||||||||
BL03326___opp 251 YTWGLLASMPSLDNDGDEELMAIPGSPPDLTNPPKGDAFALRSPYAMKID 300
BSNT_01917___ 301 FEQEPPMFKVSDTHYVKSWLLHPDAPKVEPPEAVKAKMRKLANTFEKPVL 350
|||||||||:|||||||||||||||||||||.|||:||::..|.:||||.
BL03326___opp 301 FEQEPPMFKISDTHYVKSWLLHPDAPKVEPPAAVKSKMKEFKNQYEKPVQ 350
BSNT_01917___ 351 VREGE 355
|:|||
BL03326___opp 351 VKEGE 355
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