Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01917 and BL03326
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_01917___oppD.1.5803.seq
# -bsequence dna-align/BL03326___oppD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01917___oppD-BL03326___oppD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01917___oppD-BL03326___oppD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01917___oppD
# 2: BL03326___oppD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1082
# Identity: 827/1082 (76.4%)
# Similarity: 827/1082 (76.4%)
# Gaps: 28/1082 ( 2.6%)
# Score: 3108.5
#
#
#=======================================
BSNT_01917___ 1 GTGACACGCCTATTAGAAGTAAAAGATTTAGCAATTTCATTTAAAACATA 50
.|||.||.|.||.|.|||||.|||||||||||.|||||.|||||||||||
BL03326___opp 1 ATGAAACACTTACTTGAAGTGAAAGATTTAGCCATTTCTTTTAAAACATA 50
BSNT_01917___ 51 TGGCGGAGAGGTTCAGGCGATCCGCGGAGTGAATTTCCATCTGGATAAAG 100
.|.||||||.||.||||||||||||||.||.||.||.|||.|.||.||||
BL03326___opp 51 CGCCGGAGAAGTACAGGCGATCCGCGGCGTCAACTTTCATGTTGACAAAG 100
BSNT_01917___ 101 GAGAGACACTGGCGATTGTTGGAGAATCAGGTTCCGGAAAAAGTGTAACC 150
|||||||.||.|||||.||.||.|||||.||.||.||.|||||.||.||.
BL03326___opp 101 GAGAGACGCTTGCGATCGTCGGTGAATCCGGATCAGGTAAAAGCGTCACT 150
BSNT_01917___ 151 TCTCAAGCGATTATGAAGCTGATTCCAATGCCTCCGGGTTATTTCAAACG 200
||.||.||.||||||||.||||||||.|||||.|||||.|||||.|||..
BL03326___opp 151 TCACAGGCAATTATGAAACTGATTCCGATGCCGCCGGGCTATTTTAAAAA 200
BSNT_01917___ 201 CGGTGAGATCCTGTTTGAAGGAAAGGATCTAGTGCCGCTGTCCGAAAAAG 250
|||..|.|||.|.|||||.|||.|.||.||.||.|||....|.|||||||
BL03326___opp 201 CGGACAAATCTTATTTGACGGACAAGACCTGGTTCCGAAAACGGAAAAAG 250
BSNT_01917___ 251 AAATGCAAAATG----TCCGGGGAAAAGAGATCGGCATGATATTCCAAGA 296
|.||||| | ||.||||||||||||||||||||||.||.||.||
BL03326___opp 251 AGATGCA----GTCGATCAGGGGAAAAGAGATCGGCATGATCTTTCAGGA 296
BSNT_01917___ 297 TCCGATGACCTCATTAAATCCAACGATGAAAGTCGGTAAACAAATTACGG 346
|||||||||.||.||.||.||.||.|||||||||||....|||||.||.|
BL03326___opp 297 TCCGATGACTTCTTTGAACCCTACAATGAAAGTCGGCCGCCAAATCACAG 346
BSNT_01917___ 347 AAGTGCTTTTTAAACACGAGAAAATCTCAAAGGAAGCGGCTAAAAAACGC 396
|||||||.|||||.||.||.|||||||||||.||||.|||.||.||.||.
BL03326___opp 347 AAGTGCTGTTTAAGCATGAAAAAATCTCAAAAGAAGAGGCCAATAAGCGG 396
BSNT_01917___ 397 GCGGTTGAACTGCT-GGAATTAGTCGGTATCCCAATGCCGGAAAAGCGGG 445
|||||.||.||.|| .|..|| |||||.||.||.|||||.|||...||.|
BL03326___opp 397 GCGGTAGAGCTTCTCAGCCTT-GTCGGAATTCCGATGCCTGAACGCCGCG 445
BSNT_01917___ 446 TGAACCAATTTCCGCACGAATTTTCA--GGCGGGATGAGGCAGCGGGTTG 493
|.|||||.|.|||||||||| |||| |||||||||.|||||||.||.|
BL03326___opp 446 TCAACCAGTATCCGCACGAA--TTCAGCGGCGGGATGCGGCAGCGCGTCG 493
BSNT_01917___ 494 TCATTGCCATGGCGCTTGCAGCGAATCCGAAGCTTCTGATCGCCGATGAG 543
||||.||.|||||||||||.||.|||||.||||||.|.||.||.||.||.
BL03326___opp 494 TCATCGCAATGGCGCTTGCGGCCAATCCAAAGCTTTTAATTGCGGACGAA 543
BSNT_01917___ 544 CCGACAACTGCACTTGATGTAACGATTCAAGCGCAAATTCTGGAATTGAT 593
||||||||.||.||||||||.||||||||.|||||.|||.|.||..||||
BL03326___opp 544 CCGACAACGGCTCTTGATGTGACGATTCAGGCGCAGATTTTAGAGCTGAT 593
BSNT_01917___ 594 GAAGGATTTGCAAAAGAAAATTGACACGTCCATCATCTTTATTACACACG 643
|||.||..||||.||.||.||.||.||.||||||||.||||||||.||||
BL03326___opp 594 GAAAGACCTGCAGAAAAAGATCGAGACATCCATCATTTTTATTACGCACG 643
BSNT_01917___ 644 ATCTTGGTGTTGTGGCAAATGTTGCTGACCGGGTCGCTGTCATGTACGCG 693
||||.||.|||||.||.||.||.||.|||.|.|||||.||||||||||||
BL03326___opp 644 ATCTCGGCGTTGTCGCGAACGTCGCCGACAGAGTCGCCGTCATGTACGCG 693
BSNT_01917___ 694 GGACAGATTGTAGAAACTGGTACGGTAGACGAAATCTTCTACGATCCGAG 743
|||||||||||.||.|..||||||||.|||||.||.||||||.||||||.
BL03326___opp 694 GGACAGATTGTGGAGATCGGTACGGTCGACGAGATTTTCTACAATCCGAA 743
BSNT_01917___ 744 ACATCCGTACACTTGGGGGCTTCTTGCATCCATGCCGACACTGGAAAGTT 793
.||||||||.||.||||||||.||.||.||.|||||||..||.||.|.|.
BL03326___opp 744 GCATCCGTATACATGGGGGCTGCTGGCTTCAATGCCGAGCCTTGACAATG 793
BSNT_01917___ 794 CAGGAGAGGAAGAGCTGACTGCCATTCCGGGCACACCGCCTGATTTGACA 843
..||.||.||.||..|.|..||.||.||||||.|.|||||.||||||||.
BL03326___opp 794 ACGGTGATGAGGAATTAATGGCGATACCGGGCTCTCCGCCGGATTTGACC 843
BSNT_01917___ 844 AACCCGCCAAAAGGAGATGCTTTTGCCCTGCGGAGCCCTTATGCGATGAA 893
||.|||||.||.||.|||||.|||||..|..|.|||||.||.||.|||||
BL03326___opp 844 AATCCGCCGAAGGGCGATGCCTTTGCGTTAAGAAGCCCGTACGCAATGAA 893
BSNT_01917___ 894 AATCGATTTTGAACAGGAGCCGCCAATGTTTAAGGTATCTGATACTCATT 943
||||||||||||||||||||||||.||||||||..||||||||||.||||
BL03326___opp 894 AATCGATTTTGAACAGGAGCCGCCGATGTTTAAAATATCTGATACACATT 943
BSNT_01917___ 944 ATGTCAAATCGTGGCTGCTTCATCCCGACGCGCCAAAGGTAGAGCCGCCA 993
||||.||.||.|||||..|.|||||.||.||.|||||.||.|||||.||.
BL03326___opp 944 ATGTGAAGTCATGGCTTTTGCATCCGGATGCTCCAAAAGTCGAGCCTCCG 993
BSNT_01917___ 994 GAAGCGGT-AAAAGCGAAAAT------GCGTAAACTGGCAAACACGTTTG 1036
|..||.|| |||||| ||.|| |..|||| ||.|| ||.||
BL03326___opp 994 GCGGCTGTCAAAAGC-AAGATGAAGGAGTTTAAA-----AATCA-GTATG 1036
BSNT_01917___ 1037 AAAAACCTGTCTTAGTGAGAGAAGGTGAATGA 1068
|||||||.||...|||||.|||||||||||||
BL03326___opp 1037 AAAAACCGGTTCAAGTGAAAGAAGGTGAATGA 1068
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