Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01916 and BL03325

See DNA alignment / Visit BSNT_01916 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_01916___oppC.1.5803.seq
#    -bsequence pep-align/BL03325___oppC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01916___oppC-BL03325___oppC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01916___oppC-BL03325___oppC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01916___oppC
# 2: BL03325___oppC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     232/305 (76.1%)
# Similarity:   270/305 (88.5%)
# Gaps:           0/305 ( 0.0%)
# Score: 1249.0
# 
#
#=======================================

BSNT_01916___      1 MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIII     50
                     ||.|||:||||||.:..:|||||||:||.|.|..|||:.||||:.||:::
BL03325___opp      1 MQQIPKDMFEPAAVDHSEAEKISKKNLSFWTDVFLRFKENKLALFGLVVL     50

BSNT_01916___     51 VLIILMAIFAPMFSRYDYSTTNLLNADKPPSKDHWFGTDDLGRDIFVRTW    100
                     :||.|||||||:||.:.|..|:|.||::|||.:|||||||||||:|||||
BL03325___opp     51 ILIALMAIFAPVFSSFQYEETDLTNANQPPSGEHWFGTDDLGRDVFVRTW    100

BSNT_01916___    101 VGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVP    150
                     ||||||:.||:|||::|:|||||||:|||.||||||||||||||||||:|
BL03325___opp    101 VGARISLTIGLAAALIDVLIGVIWGAISGIRGGRTDEIMMRIADILWAIP    150

BSNT_01916___    151 SLLMVILLMVVLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLA    200
                     ||||.|||:||:.|||.|:|:||.||||||||||||||||||||||:|||
BL03325___opp    151 SLLMTILLLVVMGKGLITMIVAMVITGWINMARIVRGQVLQLKNQEFVLA    200

BSNT_01916___    201 SQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEAFLSYLGLGVP    250
                     |:|||||.||::.||::||.|..||||||||||||||.||||||||||||
BL03325___opp    201 SRTLGAKNSRIIRKHLLPNIMSPILVTMTLTVPTAIFYEAFLSYLGLGVP    250

BSNT_01916___    251 APLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALD    300
                     .|||||||||:||:..|.||||||||||.|||:|||.|||:|||||||||
BL03325___opp    251 QPLASWGTMATDGVQGLEYYPWRLFFPATFICLTMFAFNVIGDGLRDALD    300

BSNT_01916___    301 PKLRK    305
                     |||||
BL03325___opp    301 PKLRK    305


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