Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01914 and BL03323

See DNA alignment / Visit BSNT_01914 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_01914___oppA.1.5803.seq
#    -bsequence pep-align/BL03323___oppA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01914___oppA-BL03323___oppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01914___oppA-BL03323___oppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01914___oppA
# 2: BL03323___oppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 545
# Identity:     388/545 (71.2%)
# Similarity:   457/545 (83.9%)
# Gaps:           4/545 ( 0.7%)
# Score: 2115.0
# 
#
#=======================================

BSNT_01914___      1 MKKRWSIVTLMLIFTLVLSACGFGGSGSNGEGKKDSKGKTTLNINIKTEP     50
                     ||||.|.::|||||||||||||||.|..:| ||||||||.|||:||||||
BL03323___opp      1 MKKRLSFISLMLIFTLVLSACGFGSSSGDG-GKKDSKGKDTLNVNIKTEP     49

BSNT_01914___     51 FSLHPGLANDSVSGGVIRQTFEGLTRINADGEPEEGMASKIETSKDGKTY    100
                     |||||||||||||..|:||||||||.|..||:|.|..|.|||.|.|.|||
BL03323___opp     50 FSLHPGLANDSVSANVLRQTFEGLTTIGKDGKPVEAAAEKIEVSDDQKTY     99

BSNT_01914___    101 TFTIRDGVKWSNGDPVTAQDFEYAWKWALDPNNESQYAYQLYYIKGAEAA    150
                     |||:|| .||||||||||:||||||||||||.|||||||||||:||.|||
BL03323___opp    100 TFTLRD-AKWSNGDPVTAEDFEYAWKWALDPKNESQYAYQLYYLKGGEAA    148

BSNT_01914___    151 NTGKGSLDDVAVKAVNDKTLKVELNNPTPYFTELTAFYTYMPINKKIAEK    200
                     |||||.::||.|||||||||||||..||||||||||||||||:|||:|||
BL03323___opp    149 NTGKGKIEDVGVKAVNDKTLKVELEKPTPYFTELTAFYTYMPVNKKVAEK    198

BSNT_01914___    201 NKKWNTNAGDDYVSNGPFKMTAWKHSGSITLEKNDQYWDKDKVKLKKIDM    250
                     |.||.|||.::|||||||||..|||||:|.|||||||||||.||||||:|
BL03323___opp    199 NAKWYTNADENYVSNGPFKMAKWKHSGNIVLEKNDQYWDKDAVKLKKINM    248

BSNT_01914___    251 VMINNNNTELKKFQAGELDWAGMPLGQLPTESLPTLKKDGSLHVEPIAGV    300
                     .|:|:.||.|..::.||||:.|.||.|:.|:::|:|||:| |:::|.|.|
BL03323___opp    249 AMVNDPNTGLNMYKKGELDFVGQPLDQISTDAIPSLKKEG-LNIDPFASV    297

BSNT_01914___    301 YWYKFNTEAKPLDNVNIRKALTYSLDRQSIVKNVTQGEQIPAMAAVPPTM    350
                     |.|||||||.||:||||||||||:::|::||||:||.||:|||..|||.:
BL03323___opp    298 YLYKFNTEAAPLNNVNIRKALTYAINREAIVKNITQAEQLPAMGLVPPAV    347

BSNT_01914___    351 KGFEDNKEGYFKDNDVKTAKEYLDKGLKEMGLSKASDLPKIKLSYNTDDA    400
                     .|||.|| |||||:||..|||:|:|||||:||.||||||||.||||||:|
BL03323___opp    348 HGFESNK-GYFKDHDVDKAKEHLEKGLKELGLKKASDLPKITLSYNTDEA    396

BSNT_01914___    401 HAKIAQAVQEMWKKNLGVDVELDNSEWNVYIDKLHSQDYQIGRMGWLGDF    450
                     |.||||||||||.|.|||||||.|.||||||||||:.:|||||:||..||
BL03323___opp    397 HQKIAQAVQEMWNKELGVDVELGNEEWNVYIDKLHAGNYQIGRLGWTADF    446

BSNT_01914___    451 NDPINFLELFRDKNGGNNDTGWENPEFKKLLNQSQTETDKTKHAELLKKA    500
                     ||.:||||.:|||.||||||.|||.::|:|||::..|||..|..||:|:|
BL03323___opp    447 NDGMNFLETYRDKEGGNNDTNWENAKYKELLNKASRETDSAKRIELMKEA    496

BSNT_01914___    501 EGIFIDEMPVAPIYFHTDTWVQDENLKGVIMPGTGEVYFRNAYFK    545
                     |.|.:||:|||||||:|..::.||:||..::.||||:||:.|:|:
BL03323___opp    497 ESIIMDELPVAPIYFYTMPYLHDESLKDFVLTGTGEIYFKTAHFE    541


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01914 and BL03323

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
