Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01905 and BL03318

See DNA alignment / Visit BSNT_01905 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_01905___appA.1.5803.seq
#    -bsequence pep-align/BL03318___appA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01905___appA-BL03318___appA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01905___appA-BL03318___appA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01905___appA
# 2: BL03318___appA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity:     362/547 (66.2%)
# Similarity:   453/547 (82.8%)
# Gaps:           4/547 ( 0.7%)
# Score: 1996.0
# 
#
#=======================================

BSNT_01905___      1 MKRRKTALMMLSVLMVLAIFLSAC-SGSKSSNSSAKKSAGKPQQGGDLVV     49
                     |.:|||...:||:|::|:|||:|| ||....:....||.|||||||||:.
BL03318___app      1 MNKRKTGFSILSLLLILSIFLTACNSGEVGGDEKEGKSDGKPQQGGDLIA     50

BSNT_01905___     50 GSIGEPTLFNSLYSTDDASTDIENMLYSFLTKTDEKLNVKLSLAESIKEL     99
                     ||.|||||||||||||.||:|||.::|:.|...:|||.|:..||:.:||.
BL03318___app     51 GSTGEPTLFNSLYSTDTASSDIERLIYNTLLDVNEKLEVENQLADEVKES    100

BSNT_01905___    100 DGGLAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDYKGERGSTYEML    149
                     :.||.:|||:|:|||||||:|:||||||||||:|:|.:|.|||||.::|:
BL03318___app    101 EDGLTFDVKLKEGVKFHDGEEMTADDVVFTYSIPMSDEYVGERGSNFKMI    150

BSNT_01905___    150 KSVEKKGDYEVLFKLKYKDGNFYNNALDSTAILPKHILGNVPIADLEENE    199
                     :||.|||.|||.||||.:|..|||..|.|..|||||||.:|||:.|.|:|
BL03318___app    151 ESVTKKGKYEVQFKLKKQDPYFYNVTLASYGILPKHILKDVPISKLGEHE    200

BSNT_01905___    200 FNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFEGRPYLDTVTYKVIPDAN    249
                     ||||.|||:|||||||||:|||:|:||.|||:.|||:||::|||:|||:|
BL03318___app    201 FNRKNPIGTGPFKFKEWKEGQYVKVEAFDDYYAGRPHLDSITYKIIPDSN    250

BSNT_01905___    250 AAVAQLQAGDINFFNV-PATDYKTAEKFNNLKIVTDLALSYVYIGWNEKN    298
                     ||::||||||:::..| |..||||||||||:|:.|||.|:|.||||||:|
BL03318___app    251 AALSQLQAGDVDYLVVTPGPDYKTAEKFNNVKMETDLGLNYTYIGWNERN    300

BSNT_01905___    299 ELFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIPESPLSWNYPKDIDV    348
                     |||||||||||||.||||:::|.||||||||:|.|||||||||||.:.|.
BL03318___app    301 ELFKDKKVRQALTHALDRQALVDQVLDGDGEIANIPESPLSWNYPDNKDK    350

BSNT_01905___    349 PK-FEYNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTNQGNKVRE    397
                     .| |||:.:|||::|.||||.|::||||||||||||||.:|||||||.||
BL03318___app    351 FKTFEYDPEKAKKLLKEAGWTDSDGDGILDKDGKKFSFVIKTNQGNKTRE    400

BSNT_01905___    398 DIAVVVQEQLKKIGIEVKTQIVEWSALVEQMNPPNWDFDAMVMRWSLSTF    447
                     |:|||||:|||:|||:.|.||||||||:|||||||||||||:|.|||:||
BL03318___app    401 DLAVVVQQQLKEIGIQAKPQIVEWSALIEQMNPPNWDFDAMIMGWSLATF    450

BSNT_01905___    448 PDQYDIFHSSQIKKGLNYVWYKNAEADKLMKDAKSISDRKQYSKEYEQIY    497
                     |||.:||||.:.:||||||||:|.:.|||:.:||::.||::|.|.||.||
BL03318___app    451 PDQSNIFHSKEAEKGLNYVWYQNEKLDKLLDEAKTLKDREEYKKAYEDIY    500

BSNT_01905___    498 QKIAEDQPYTFLYYPNNHMAMPENLEGYKYHPKRDLYNIEKWWLEK-    543
                     :.:|||||||||||.|.|.|||:|::||.:|||.|.|..|.|||:: 
BL03318___app    501 EILAEDQPYTFLYYTNYHRAMPKNMKGYVFHPKEDFYKAEDWWLDQK    547


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01905 and BL03318

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
