Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01904 and BL03317

See DNA alignment / Visit BSNT_01904 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_01904___appF.1.5803.seq
#    -bsequence pep-align/BL03317___appF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01904___appF-BL03317___appF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01904___appF-BL03317___appF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01904___appF
# 2: BL03317___appF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:     287/340 (84.4%)
# Similarity:   306/340 (90.0%)
# Gaps:          11/340 ( 3.2%)
# Score: 1493.0
# 
#
#=======================================

BSNT_01904___      1 MTAA-----------NQETILELRDVKKYFPIRSGLFQRKVGDVKAVDGV     39
                     ||::           .||::|||:|||||||||||:||:|:||||||||:
BL03317___app      1 MTSSAEQLQPGQEMNPQESLLELKDVKKYFPIRSGIFQKKIGDVKAVDGI     50

BSNT_01904___     40 SFSLKKGETLGIVGESGCGKSTAGRTMIRLYKPTEGQILFKGQDISNLSE     89
                     |||||:||||||||||||||||||||||||||||.|||.:||:|||:|||
BL03317___app     51 SFSLKRGETLGIVGESGCGKSTAGRTMIRLYKPTAGQIFYKGRDISSLSE    100

BSNT_01904___     90 EKLRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFNTHNMYTMRERNEK    139
                     |.|||||||||||||||||||||||||||||||||||||:||..:|||||
BL03317___app    101 EALRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFNTHHMYNFKERNEK    150

BSNT_01904___    140 VEELLARVGLHPSFAGRYPHEFSGGQRQRIGIARALTLNPELIIADEPVS    189
                     .|||||:||||||||.||||||||||||||||||||.|||||||||||||
BL03317___app    151 AEELLAKVGLHPSFANRYPHEFSGGQRQRIGIARALALNPELIIADEPVS    200

BSNT_01904___    190 ALDVSIQAQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKM    239
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03317___app    201 ALDVSIQAQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKM    250

BSNT_01904___    240 MELTGKHELYDNPLHPYTQALLSSVPVTRKRGSVKRERIVLKGELPSPAN    289
                     ||||.|||||.||||||||||||:||||||:|..||||||||||||||||
BL03317___app    251 MELTDKHELYGNPLHPYTQALLSAVPVTRKKGGTKRERIVLKGELPSPAN    300

BSNT_01904___    290 PPKGCVFHTRCPVAKPICKEQIPEFKEAAPSHFVACHLYS    329
                     ||||||||||||.||.||.|..|.|||...:||||||||.
BL03317___app    301 PPKGCVFHTRCPAAKAICAEAEPAFKEVKTNHFVACHLYE    340


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