Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01904 and BL03317
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_01904___appF.1.5803.seq
# -bsequence pep-align/BL03317___appF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01904___appF-BL03317___appF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01904___appF-BL03317___appF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01904___appF
# 2: BL03317___appF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 287/340 (84.4%)
# Similarity: 306/340 (90.0%)
# Gaps: 11/340 ( 3.2%)
# Score: 1493.0
#
#
#=======================================
BSNT_01904___ 1 MTAA-----------NQETILELRDVKKYFPIRSGLFQRKVGDVKAVDGV 39
||:: .||::|||:|||||||||||:||:|:||||||||:
BL03317___app 1 MTSSAEQLQPGQEMNPQESLLELKDVKKYFPIRSGIFQKKIGDVKAVDGI 50
BSNT_01904___ 40 SFSLKKGETLGIVGESGCGKSTAGRTMIRLYKPTEGQILFKGQDISNLSE 89
|||||:||||||||||||||||||||||||||||.|||.:||:|||:|||
BL03317___app 51 SFSLKRGETLGIVGESGCGKSTAGRTMIRLYKPTAGQIFYKGRDISSLSE 100
BSNT_01904___ 90 EKLRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFNTHNMYTMRERNEK 139
|.|||||||||||||||||||||||||||||||||||||:||..:|||||
BL03317___app 101 EALRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFNTHHMYNFKERNEK 150
BSNT_01904___ 140 VEELLARVGLHPSFAGRYPHEFSGGQRQRIGIARALTLNPELIIADEPVS 189
.|||||:||||||||.||||||||||||||||||||.|||||||||||||
BL03317___app 151 AEELLAKVGLHPSFANRYPHEFSGGQRQRIGIARALALNPELIIADEPVS 200
BSNT_01904___ 190 ALDVSIQAQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKM 239
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03317___app 201 ALDVSIQAQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKM 250
BSNT_01904___ 240 MELTGKHELYDNPLHPYTQALLSSVPVTRKRGSVKRERIVLKGELPSPAN 289
||||.|||||.||||||||||||:||||||:|..||||||||||||||||
BL03317___app 251 MELTDKHELYGNPLHPYTQALLSAVPVTRKKGGTKRERIVLKGELPSPAN 300
BSNT_01904___ 290 PPKGCVFHTRCPVAKPICKEQIPEFKEAAPSHFVACHLYS 329
||||||||||||.||.||.|..|.|||...:||||||||.
BL03317___app 301 PPKGCVFHTRCPAAKAICAEAEPAFKEVKTNHFVACHLYE 340
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