Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01904 and BL03317
See
Amino acid alignment /
Visit
BSNT_01904 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence dna-align/BSNT_01904___appF.1.5803.seq
# -bsequence dna-align/BL03317___appF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01904___appF-BL03317___appF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01904___appF-BL03317___appF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01904___appF
# 2: BL03317___appF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1043
# Identity: 765/1043 (73.3%)
# Similarity: 765/1043 (73.3%)
# Gaps: 73/1043 ( 7.0%)
# Score: 2742.0
#
#
#=======================================
BSNT_01904___ 1 ATGA---CAGCAGCTAATCAA---------------GAAA--------CA 24
|||| ||.|||||.|.||| |||| ||
BL03317___app 1 ATGACTTCATCAGCTGAACAATTACAGCCCGGACAGGAAATGAACCCGCA 50
BSNT_01904___ 25 A--------TCTTAGAGCTTCGTGACGTAAAAAAATACTTTCCGATCCGG 66
| || |.|||||....|||||.|||||.||||||||||||||.
BL03317___app 51 AGAATCCCTTC-TGGAGCTGAAAGACGTCAAAAAGTACTTTCCGATCCGC 99
BSNT_01904___ 67 TCAGGCCTTTTTCAAAGAAAAGTCGGTGATGTAAAAGCGGTGGATGGTGT 116
|||||..|||||||.|.||||.||||.|||||.|||||||||||.| |.
BL03317___app 100 TCAGGGATTTTTCAGAAAAAAATCGGCGATGTCAAAGCGGTGGACG--GC 147
BSNT_01904___ 117 TTCA--TTTTCGTTAAAAAAAGGAGAAACACTCGGAATCGTTGGAGAGTC 164
.||| ||||||.|.|||...||.|||||.|||||.||.||.||.||.||
BL03317___app 148 ATCAGCTTTTCGCTTAAACGCGGCGAAACGCTCGGCATTGTCGGTGAATC 197
BSNT_01904___ 165 GGGCTGCGGAAAATCGACTGCCGGCAGAACGATGATCAGACTGTACAAAC 214
||||||||||||.|||||.|||||..|.|||||||||.|.||.||.||||
BL03317___app 198 GGGCTGCGGAAAGTCGACCGCCGGACGGACGATGATCCGCCTTTATAAAC 247
BSNT_01904___ 215 CGACAG-AGGGCCAAATTCTTTTTAAAGGGCAGGATATTTCCAATCTGTC 263
||||.| |||| ||.|||.|||..|||||.|..||.|||||.|.|.||||
BL03317___app 248 CGACGGCAGGG-CAGATTTTTTACAAAGGCCGCGACATTTCAAGTTTGTC 296
BSNT_01904___ 264 AGAGGAGAAGC--TGCGGAAGAGTGTCCGCAAAAATATTCAAATGGTTTT 311
.|| |||||| ||.|.||.||.|||||||||||.||.||.||||||||
BL03317___app 297 GGA--AGAAGCTTTGAGAAAAAGCGTCCGCAAAAACATCCAGATGGTTTT 344
BSNT_01904___ 312 CCAAGATCCATTTGCTTCGTTAAACCCGAGAAAGACCCTGCGTTCCATCA 361
|||||||||.|||||.||..|.|||||||||||.||.|||||||||||||
BL03317___app 345 CCAAGATCCGTTTGCCTCACTGAACCCGAGAAAAACGCTGCGTTCCATCA 394
BSNT_01904___ 362 TAAAGGAGCCGTTTAATACGCACAACATGTATACCATGCGT-----GAAC 406
|.||.||.||.||.||.||| ||.|||.|.|||.|| | ||.|
BL03317___app 395 TCAAAGAACCCTTCAACACG--CATCATATGTACAAT---TTCAAAGAGC 439
BSNT_01904___ 407 GAAACGAAAAAGTTGAAGAGCTGCTTG-CAAGAGTAGGGCTTCACCCGTC 455
|.||||||||||..||||||||..|.| |||| ||.|||||.||||||||
BL03317___app 440 GCAACGAAAAAGCCGAAGAGCTTTTAGCCAAG-GTCGGGCTGCACCCGTC 488
BSNT_01904___ 456 GTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGA 505
||||||...|||.||||||||.||.|||||.||.||.|||||.|||||||
BL03317___app 489 GTTTGCGAACCGCTATCCCCACGAATTTTCCGGGGGGCAGCGCCAGCGGA 538
BSNT_01904___ 506 TCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGAT 555
||||.||.||..|.||.||..||||.|||||.|||||.||.||.||.|||
BL03317___app 539 TCGGAATCGCGCGGGCGCTGGCTTTAAATCCGGAGCTTATTATCGCCGAT 588
BSNT_01904___ 556 GAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGTGATTAACTT 605
||.|||||.||||||.|.||.||.||.||.|||||.||||||||.|||.|
BL03317___app 589 GAACCGGTATCCGCATTGGACGTGTCAATCCAGGCTCAAGTGATCAACCT 638
BSNT_01904___ 606 GATGGAGGAATTACAGGAAGAATTTAATCTTACGTATCTATTTATCTCTC 655
||||||.||..|.|||||||||||.|||||.||.|||.|.||.||.||.|
BL03317___app 639 GATGGAAGAGCTTCAGGAAGAATTCAATCTGACATATTTGTTCATTTCCC 688
BSNT_01904___ 656 ATGATCTGAGTGTCGTCCGCCATATCAGCGACAGAGTCGGAGTAATGTAT 705
||||..||||.|||||||||||||||||||||||.|||||.||.||||||
BL03317___app 689 ATGACTTGAGCGTCGTCCGCCATATCAGCGACAGGGTCGGCGTCATGTAT 738
BSNT_01904___ 706 CTTGGCAAAATGATGGAACTGACCGGCAAGCATGAGCTTTATGACAACCC 755
||.||||||||||||||.|||||.|.||||||||||||.||.|.||||||
BL03317___app 739 CTCGGCAAAATGATGGAGCTGACAGACAAGCATGAGCTGTACGGCAACCC 788
BSNT_01904___ 756 GCTTCACCCATATACCCAAGCGCTTTTATCCTCCGTTCCTGTTACAAGAA 805
||||||.|||||.||.||.||||||.|.|||.|||||||.||.||.||.|
BL03317___app 789 GCTTCATCCATACACGCAGGCGCTTCTGTCCGCCGTTCCCGTCACTAGGA 838
BSNT_01904___ 806 AAAGAGGATCTG-TCAAA-CGTGAACGCATTGTCCTGAAGGGAGAACTGC 853
|.|.||| |.| .|||| ||.||.||.||.||..|.||.||.||.||||
BL03317___app 839 AGAAAGG--CGGAACAAAGCGGGAGCGAATCGTTTTAAAAGGCGAGCTGC 886
BSNT_01904___ 854 CTAGTCCGGCCAACCCGCCAAAAGGCTGCGTATTCCACACAAGATGTCCT 903
|.|||||.||||||||.||.||||||||.||.||.||.||.||.|||||.
BL03317___app 887 CGAGTCCCGCCAACCCTCCGAAAGGCTGTGTCTTTCATACGAGGTGTCCG 936
BSNT_01904___ 904 GTTGCAAAACCGATATGCAAGGAA--CAAATACCAGAATTTAAAGAAGCT 951
|..||||||.||||.|||..|||| |.| |||.|..||.||.|||| |
BL03317___app 937 GCCGCAAAAGCGATTTGCGCGGAAGCCGA--ACCTGCTTTCAAGGAAG-T 983
BSNT_01904___ 952 G-CTCCCAGCCACTTTGTGGCTTGTCACCTTTATAGCTAA--- 990
| ...|.|.|||.||.|||||.||||||||||| |.||
BL03317___app 984 GAAAACAAACCATTTCGTGGCATGTCACCTTTA---CGAATAA 1023
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.