Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01903 and BL03316
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_01903___appD.1.5803.seq
# -bsequence pep-align/BL03316___appD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01903___appD-BL03316___appD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01903___appD-BL03316___appD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01903___appD
# 2: BL03316___appD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity: 271/328 (82.6%)
# Similarity: 293/328 (89.3%)
# Gaps: 4/328 ( 1.2%)
# Score: 1401.0
#
#
#=======================================
BSNT_01903___ 1 MSTLLEVNNLKTYFFRKKEPIPAVDGVDFHISKGETVALVGESGSGKSIT 50
||.|||||:|||||||||:||||||||||.|.||||||||||||||||||
BL03316___app 1 MSALLEVNDLKTYFFRKKQPIPAVDGVDFSIKKGETVALVGESGSGKSIT 50
BSNT_01903___ 51 SLSIMGLVQSSGGKIMDGSIKLEDKDLTSFTENDYCKIRGNEVSMIFQEP 100
||||||||:.||||||.||||||.:||.::.|.|.|||||||:|||||||
BL03316___app 51 SLSIMGLVEGSGGKIMSGSIKLEGQDLVTYKEQDLCKIRGNEISMIFQEP 100
BSNT_01903___ 101 MTSLNPVLTIGEQITEVLIYHKNMKKKEARQRAVELLQMVGFSRAEQIMK 150
||||||||||||||||||||||.:.||||.::|||||::||||||.::||
BL03316___app 101 MTSLNPVLTIGEQITEVLIYHKKLSKKEAAKKAVELLKLVGFSRAGELMK 150
BSNT_01903___ 151 EYPHRLSGGMRQRVMIAIALSCNPKLLIADEPTTALDVTIQAQVLELMKD 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03316___app 151 EYPHRLSGGMRQRVMIAIALSCNPKLLIADEPTTALDVTIQAQVLELMKD 200
BSNT_01903___ 201 LCQKFNTSILLITHDLGVVSEAADRVIVMYCGQVVENATVDDLFLEPLHP 250
||.||:|||||||||||||||.|||||||||||||||||||:||.|||||
BL03316___app 201 LCDKFDTSILLITHDLGVVSEIADRVIVMYCGQVVENATVDELFDEPLHP 250
BSNT_01903___ 251 YTEGLLTSIPVIDGEIDKLNAIKGSVPTPDNLPPGCRFAPRCPKAMDKCW 300
||:|||.|||||:|.|:||.||||:||||||||.|||||||||.|:||||
BL03316___app 251 YTKGLLNSIPVIEGSIEKLTAIKGNVPTPDNLPAGCRFAPRCPSAVDKCW 300
BSNT_01903___ 301 TNQPSLLTHKSGRTVRCFLYEEEGAEQS 328
..||.|.|...||:||||||||..
BL03316___app 301 GAQPDLKTRPDGRSVRCFLYEEGE---- 324
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