Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01903 and BL03316
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence dna-align/BSNT_01903___appD.1.5803.seq
# -bsequence dna-align/BL03316___appD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01903___appD-BL03316___appD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01903___appD-BL03316___appD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01903___appD
# 2: BL03316___appD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1009
# Identity: 743/1009 (73.6%)
# Similarity: 743/1009 (73.6%)
# Gaps: 56/1009 ( 5.6%)
# Score: 2679.0
#
#
#=======================================
BSNT_01903___ 1 ATGAGCACACTTTTAGAAGTGAATAATTTAAAGACATATTTTTTCAGGAA 50
||||||.||.|..|.|||||.|||.|||||||.||.||||||||.|||||
BL03316___app 1 ATGAGCGCATTGCTGGAAGTCAATGATTTAAAAACTTATTTTTTTAGGAA 50
BSNT_01903___ 51 AAAGGAGCCGATCCCTGCGGTTGACGGAGTCGA-TTTTCACATCAGCAAA 99
|||..|||||||.|||||.||.|||||.||||| |||||| ||.|..|||
BL03316___app 51 AAAACAGCCGATACCTGCAGTGGACGGCGTCGATTTTTCA-ATTAAAAAA 99
BSNT_01903___ 100 GGCGAAACCGTCGCGCTTGTAGGTGAATCGGGCTCCGGAAAAAGCATTAC 149
||.||||||||.|||||.||.|||||||||||.|||||.|||||||||||
BL03316___app 100 GGGGAAACCGTTGCGCTGGTCGGTGAATCGGGATCCGGTAAAAGCATTAC 149
BSNT_01903___ 150 TTCTTTATCAATTATGGGCCTCGTCCAAAGCTCAGGCGGAAAAATCATGG 199
.|||||.|||||.|||||.||.|||.|..||||.||||||||.||||||.
BL03316___app 150 CTCTTTGTCAATCATGGGACTGGTCGAGGGCTCGGGCGGAAAGATCATGA 199
BSNT_01903___ 200 ACGGCTCTATTAAACTCGAA-GACAAAGACCTCACCTCATTCACTGAAAA 248
.|||||||||.||.|||||| ||| |.||.|||....|||.||..|||.|
BL03316___app 200 GCGGCTCTATCAAGCTCGAAGGAC-AGGATCTCGTTACATACAAAGAACA 248
BSNT_01903___ 249 CGATTATTGCAAAATCCGCGGTAACGAAGTATCCATGATCTTTCAGGAAC 298
.||||..|||||.||||||||.||.|||.|.||||||||.||||||||||
BL03316___app 249 AGATTTATGCAAGATCCGCGGAAATGAAATCTCCATGATTTTTCAGGAAC 298
BSNT_01903___ 299 CAATGACCTCCCTTAATCCGGTGTTAACAATCGGAGAACAAATTACCGAA 348
|.||||||||.||.||||||||.||.||.|||||.||||||||.||.|||
BL03316___app 299 CGATGACCTCGCTCAATCCGGTTTTGACGATCGGCGAACAAATCACAGAA 348
BSNT_01903___ 349 GTGCTGATTTACCATAAAAACATGAAGAAAAAAGAAGCCCGTC-AACGAG 397
||||||||.||.||||||||..|...||||||||||| |||.| ||..||
BL03316___app 349 GTGCTGATCTATCATAAAAAGCTATCGAAAAAAGAAG-CCGCCAAAAAAG 397
BSNT_01903___ 398 CTGTTGAACTCTTGCAGATGGTCGGTTTCTC-----CCGGGCGGAGCAAA 442
|.||.|||.|.||..||.|.|||||.||.|| |||| .||||
BL03316___app 398 CGGTAGAATTATTAAAGCTTGTCGGATTTTCAAGAGCCGG--CGAGC--- 442
BSNT_01903___ 443 TTATGAAGGAGTACCCGCATCGGCTGTCCGGCGGTATGAGACAGAGGGTG 492
|.|||||.|||||.|||||.||.|||||.|||||.|||||.||||||||.
BL03316___app 443 TGATGAAAGAGTATCCGCACCGCCTGTCGGGCGGCATGAGGCAGAGGGTC 492
BSNT_01903___ 493 ATGATTGCCATCGCACTGAGCTGTAATCCTAAACTGCTCATTGCCGATGA 542
|||||.|||||.||..|.|||||.|||||.||.|||||.||.||.|||||
BL03316___app 493 ATGATCGCCATTGCCTTAAGCTGCAATCCGAAGCTGCTGATCGCGGATGA 542
BSNT_01903___ 543 ACCAACGACAGCGCTGGACGTGACAATACAAGCCCAGGTGCTGGAGCTCA 592
|||.|||||||||||.|||||.||.||.||||||||.||||||||.||.|
BL03316___app 543 ACCGACGACAGCGCTTGACGTCACCATTCAAGCCCAAGTGCTGGAACTGA 592
BSNT_01903___ 593 TGAAAGATCTCTGTCAGAAGTTCAATACATCGATTCTTCTCATCACACAC 642
|||||||.||.||..|.||.|||.||||.||.||.||||||||.||.|||
BL03316___app 593 TGAAAGACCTATGCGACAAATTCGATACCTCCATACTTCTCATTACCCAC 642
BSNT_01903___ 643 GACTTAGGTGTCGTGTCTGAGGCTGCCGATAGAGTGATTGTCATGTACTG 692
||..|.||.||.|||||.||...|||.||..|.|||||.||||||||.||
BL03316___app 643 GATCTCGGCGTTGTGTCCGAAATTGCGGACCGCGTGATCGTCATGTATTG 692
BSNT_01903___ 693 CGGACAAGTCGTAGAAAACGCTACAGTTGATGACTTATTTTTAGAACCGC 742
|||||||||.||.|||||.||.|||||.||.||..||||....|||||.|
BL03316___app 693 CGGACAAGTTGTTGAAAATGCCACAGTAGACGAGCTATTCGACGAACCCC 742
BSNT_01903___ 743 TTCATCCGTATACAGAAGGCCTGCTTACGTCAATTCCTGTTATAGATGGA 792
|.|||||.||||||.||||.|||.|.|..||.||.|||||.||.||.||.
BL03316___app 743 TGCATCCCTATACAAAAGGACTGTTAAACTCCATCCCTGTCATTGAAGGC 792
BSNT_01903___ 793 GAGATTGATAAATTAAATGCAATTAAAGGCAGTGTGCCTACACCGGATAA 842
...|||||.|||||||..||.||||||||.|.||||||.||.||.||.||
BL03316___app 793 TCCATTGAAAAATTAACAGCCATTAAAGGAAATGTGCCGACGCCTGACAA 842
BSNT_01903___ 843 TCTGCC-GCCGGGGTGCCGTTTTGCCCCAAGGTGCCCGAAAGCTATGGAT 891
.||.|| ||| ||.|||||.||.||.||||||||.||||..||..|.||.
BL03316___app 843 CCTTCCTGCC-GGCTGCCGGTTCGCTCCAAGGTGTCCGAGCGCGGTCGAC 891
BSNT_01903___ 892 AAGTGCTGG-----ACAAATCAGCCTTCGCTTTTGACACACAAAAGCGGA 936
||.|||||| .| |..|||.| |||| |||.|||..
BL03316___app 892 AAATGCTGGGGGGCGC-AGCCAGAC-------TTGA-----AAACGCGTC 928
BSNT_01903___ 937 AGAACG--------GTGAGATGCTTTTTATATGAGGAAGAGGGTGCCGAA 978
.|.||| ||.|||||.|||||||||||| ||||| .|||
BL03316___app 929 CGGACGGCCGGTCTGTCAGATGTTTTTTATATGAG---GAGGG---AGAA 972
BSNT_01903___ 979 CAATCATGA 987
.||
BL03316___app 973 TAA------ 975
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