Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01900 and BL03315

See DNA alignment / Visit BSNT_01900 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_01900___yjaZ.1.5803.seq
#    -bsequence pep-align/BL03315___yjaZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01900___yjaZ-BL03315___yjaZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01900___yjaZ-BL03315___yjaZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01900___yjaZ
# 2: BL03315___yjaZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     146/262 (55.7%)
# Similarity:   199/262 (76.0%)
# Gaps:           1/262 ( 0.4%)
# Score: 798.0
# 
#
#=======================================

BSNT_01900___      1 MSVEQTYSWLRKAGSIDDLAHYIIPLFSGAEKKNWKGILGHLQHHGMFKN     50
                     ||:..||.||.:|.|:.:|..:::|.|.||.|.:...|:.|||.||:|::
BL03315___yja      1 MSIASTYEWLEQASSVRELPSFLLPYFKGASKADAAAIVSHLQIHGLFRS     50

BSNT_01900___     51 IKEGIQTVSKLKEKGFYGHIQKEEQYLKNKWQGPDVPIVTLPVDERNRRI    100
                     ..:|.:|:.:|||.|.:.|:::|||.|..:|.||||||..||||||||:|
BL03315___yja     51 WTDGERTMKQLKENGVFQHVRREEQLLCKRWNGPDVPIFILPVDERNRKI    100

BSNT_01900___    101 RLEFGSKSGLAFQDKMFLFLSSDLDFGSVSALMTHEYHHVCRLGHLTKEE    150
                     |:||||||||||.||:|||||:||...|:||:|||||:|||||.::.|||
BL03315___yja    101 RVEFGSKSGLAFSDKLFLFLSADLPRSSISAIMTHEYNHVCRLENMPKEE    150

BSNT_01900___    151 KDVTLLDTIIMEGLAEYAVYERFGRSQTAEWTTWYTPEQLQALYEKKIAP    200
                     |.:|||||||:||||||||:||.|.::||.||::|:.:||:...::.:.|
BL03315___yja    151 KKMTLLDTIILEGLAEYAVFERLGEAETAAWTSYYSEKQLRHFQDRFVKP    200

BSNT_01900___    201 HRDIKR-DNRLFPQLLFGKGYQPKMLGYAVGFNIVKKYLTASKASAADGL    249
                     |.|::| |.|||..:|||||:.|.|||||||::||||||:|.|...||.|
BL03315___yja    201 HFDLRRHDGRLFSNILFGKGHYPDMLGYAVGYSIVKKYLSARKLKVADVL    250

BSNT_01900___    250 SIPAETFLDAML    261
                     :.|:|.|:...|
BL03315___yja    251 AFPSEDFIKLSL    262


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.