Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03243 and BL03304
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence pep-align/BSNT_03243___ypmQ.1.5803.seq
# -bsequence pep-align/BL03304___ypmQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03243___ypmQ-BL03304___ypmQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03243___ypmQ-BL03304___ypmQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03243___ypmQ
# 2: BL03304___ypmQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 139/207 (67.1%)
# Similarity: 168/207 (81.2%)
# Gaps: 15/207 ( 7.2%)
# Score: 747.5
#
#
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BSNT_03243___ 1 MKVIKGL-TAGLIFLFLCACGGQQIKNPLNYEVEPFTFQNQDGKNVSLES 49
||.:.|: .||::.:||.:||..:|.|||||:|:.|:|||||||.|:|||
BL03304___ypm 1 MKNVFGIFLAGILTVFLSSCGTSKIDNPLNYDVQSFSFQNQDGKAVTLES 50
BSNT_03243___ 50 LKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPE 99
|||:||:||||||||||||||||:||.:|||:::.||:..||:|||||||
BL03304___ypm 51 LKGQVWVADFIFTNCETICPPMTSHMAELQKQMEEENLQARIVSFSVDPE 100
BSNT_03243___ 100 NDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGE 149
||.|::||||||||||||.||||||||||.|||:|||||||:||||||.|
BL03304___ypm 101 NDTPEKLKKFAANYPLSFQNWDFLTGYSQEEIEKFALKSFKSIVKKPEDE 150
BSNT_03243___ 150 DQVIHQSSFWLVGPNGKVLKDYNGVENTPYDEIIADVKSAGALKEVRRLG 199
|||||||||:||..||||:|||:|..||||||||||:|:. |.|
BL03304___ypm 151 DQVIHQSSFYLVDQNGKVVKDYDGARNTPYDEIIADIKTL----ENR--- 193
BSNT_03243___ 200 ICKSSKT 206
BL03304___ypm 193 ------- 193
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