Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03251 and BL03301
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence pep-align/BSNT_03251___ypkP.1.5803.seq
# -bsequence pep-align/BL03301___ypkP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03251___ypkP-BL03301___ypkP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03251___ypkP-BL03301___ypkP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03251___ypkP
# 2: BL03301___ypkP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 102/207 (49.3%)
# Similarity: 141/207 (68.1%)
# Gaps: 1/207 ( 0.5%)
# Score: 524.0
#
#
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BSNT_03251___ 1 MVRYSLLVVYIVYMLLKNMKQLFNQTMLDPRLSYKKQMTLVYEQPKAFLE 50
|:||..|.:|..|||:|::|.|.....|||||||..||..|:::|||||.
BL03301___ypk 1 MLRYCFLWIYSAYMLIKHIKLLQALQTLDPRLSYANQMEAVFDKPKAFLR 50
BSNT_03251___ 51 GCIGISGSVVTIHQPEPIPHGPVLYVHPRLHLAELALIAGYIEEPAGFIA 100
||||::||.|:|||....|.||||||||:|.|:|||::.|::::.|.|.|
BL03301___ypk 51 GCIGLTGSTVSIHQNGRSPAGPVLYVHPKLGLSELAVLLGHLDKTASFFA 100
BSNT_03251___ 101 NPKVFRLPFIGQWLDRMDVI-SDGDSEKVYEDVTKQLEKGQSLILSLDGS 149
:|:.||.|.|..||::|..: ...|.|...|:|.:.|.||||.|:|.|..
BL03301___ypk 101 DPRAFRYPLISGWLNKMAAVRKSADKEASLEEVEEILRKGQSFIMSEDDG 150
BSNT_03251___ 150 IDPVELAARYHLPLVMVETKGTDNMQKGSFFKRLKPADIELSFSKAYIPA 199
:|...|:.|..:|:|.|||.||::|:||:.||||:|.||:|:...||:..
BL03301___ypk 151 LDYKSLSKRLGIPIVAVETAGTEDMKKGTLFKRLRPVDIDLTIHPAYVMT 200
BSNT_03251___ 200 NEKQLRA 206
..|||||
BL03301___ypk 201 ENKQLRA 207
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