Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04454 and BL03292

See DNA alignment / Visit BSNT_04454 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence pep-align/BSNT_04454___ytlC.1.5803.seq
#    -bsequence pep-align/BL03292___ytlC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04454___ytlC-BL03292___ytlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04454___ytlC-BL03292___ytlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04454___ytlC
# 2: BL03292___ytlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     186/262 (71.0%)
# Similarity:   218/262 (83.2%)
# Gaps:           2/262 ( 0.8%)
# Score: 980.0
# 
#
#=======================================

BSNT_04454___      1 MSFLHVDHVTHTYFSIKEKTTAVRDIHFDAEKGDFISFLGPSGCGKTTLL     50
                     ||||.|..|||||||:||||.|:.::..:.|||:|:||||||||||||||
BL03292___ytl      1 MSFLQVQDVTHTYFSLKEKTAALENVSIEVEKGEFVSFLGPSGCGKTTLL     50

BSNT_04454___     51 SIIAGLIEPSEGRVLIEGREPNQKEHNIGYMLQQDYLFPWKSIEENVLLG    100
                     |||||::.|:|||||:|||.|:.|:.:||||||||||||||:||||||:|
BL03292___ytl     51 SIIAGIVSPTEGRVLVEGRTPDGKDRHIGYMLQQDYLFPWKTIEENVLIG    100

BSNT_04454___    101 LKIADTLTEESKAAALGLLPEFGLIDVEKKYPKELSGGMRQRAALARTLA    150
                     |.|:..|..|:|..|||||.:|||.:||||||||||||||||||||||||
BL03292___ytl    101 LHISKKLGPETKETALGLLKKFGLYEVEKKYPKELSGGMRQRAALARTLA    150

BSNT_04454___    151 PNPSLLLLDEPFSALDFQTKLSLENLVFRTLKEYQKTAVLVTHDIGEAIA    200
                     .:|.:|||||||||||:||||:||:|||.|||.|||||||||||||||||
BL03292___ytl    151 VDPDILLLDEPFSALDYQTKLNLEDLVFNTLKTYQKTAVLVTHDIGEAIA    200

BSNT_04454___    201 MSDTIFLFSNQPGTIHQIFTIPKELAAMLPFDARQEPSFQTLFQTIWKEL    250
                     |||.|.|||.||||||:.|.:|:.:..:.||:|||||.||.|||.|||||
BL03292___ytl    201 MSDRILLFSKQPGTIHKTFAVPEPIRKLTPFEARQEPEFQPLFQNIWKEL    250

BSNT_04454___    251 NSLEKQQRNH--    260
                     |.||:|....  
BL03292___ytl    251 NDLEQQTSETKS    262


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