Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04454 and BL03292

See Amino acid alignment / Visit BSNT_04454 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_04454___ytlC.1.5803.seq
#    -bsequence dna-align/BL03292___ytlC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04454___ytlC-BL03292___ytlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04454___ytlC-BL03292___ytlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04454___ytlC
# 2: BL03292___ytlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 832
# Identity:     572/832 (68.8%)
# Similarity:   572/832 (68.8%)
# Gaps:          92/832 (11.1%)
# Score: 1838.0
# 
#
#=======================================

BSNT_04454___      1 ATGTCTTTCTTACATGTCGACCATGTAACCCATACTTATTTTTCTATT-A     49
                     .|||||||..|.||.||..|..||||.||.||||||||.||||| ||| |
BL03292___ytl      1 GTGTCTTTTCTGCAAGTTCAGGATGTCACACATACTTACTTTTC-ATTGA     49

BSNT_04454___     50 AAGAAAAAACAACGGCTGTGCGGGA-----TATTCATTTCGATGCCGAAA     94
                     |.|||||||||.||||   ||.|||     |...||||  ||.|.|||||
BL03292___ytl     50 AGGAAAAAACAGCGGC---GCTGGAAAACGTCAGCATT--GAAGTCGAAA     94

BSNT_04454___     95 AAGGCGATTTCATCTCATTTCTCGGCCCAAGCGGCTGCGGAAAAACAACA    144
                     |||||||.||..|.||.|||||||||||||||||.|||||.|||||||| 
BL03292___ytl     95 AAGGCGAATTTGTTTCGTTTCTCGGCCCAAGCGGATGCGGCAAAACAAC-    143

BSNT_04454___    145 TTGCTT---TCCATTATTGCCGG-TTTGATTGAGCCATCAGAAGGCAGAG    190
                       ||||   ||.||.||.||||| .|.|.||...||| |.|||||..|.|
BL03292___ytl    144 --GCTTTTATCGATCATCGCCGGCATCGTTTCCCCCA-CGGAAGGACGCG    190

BSNT_04454___    191 TTCTGATTGAAGGCCGTGAGCCGAATCAAAAAGAACATAATATTGGCTAT    240
                     |..||.|||||||.||....||..||..|||.||.|...|.||.||.|||
BL03292___ytl    191 TCTTGGTTGAAGGGCGCACACCTGATGGAAAGGATCGGCACATCGGTTAT    240

BSNT_04454___    241 ATGCTTCAGCAGGATTACTTATTTCCCTGGAAATCTATCGAGGAAAATGT    290
                     |||||.|||||||||||.|||||||||||||||.|.||.||||||||.||
BL03292___ytl    241 ATGCTCCAGCAGGATTATTTATTTCCCTGGAAAACCATTGAGGAAAACGT    290

BSNT_04454___    291 GCTT-CTCGGTTT----------AAAAATC---GCC--GACACGCTGACA    324
                      ||| .|||||||          |||||.|   |||  ||.|||      
BL03292___ytl    291 -CTTAATCGGTTTGCACATTTCCAAAAAACTAGGCCCGGAAACG------    333

BSNT_04454___    325 GAAGAAAGCAAAGCCGCTGCACTCGGTCTATTGCCGGAGTTCGGCCTCAT    374
                          |||.||| |||||   |||||.||..||....|.|||||.|| .|
BL03292___ytl    334 -----AAGGAAA-CCGCT---CTCGGCCTGCTGAAAAAATTCGGGCT-TT    373

BSNT_04454___    375 A-GATGTGGAGAAAAAATATCCGAAAGAACTGTCAGGCGGGATGCGCCAG    423
                     | ||.||.||.|||||.|||||.|||||.||.||.|||||.|||.|.||.
BL03292___ytl    374 ACGAGGTTGAAAAAAAGTATCCAAAAGAGCTCTCGGGCGGCATGAGGCAA    423

BSNT_04454___    424 CGGGCTGCGCTTGCAAGAACACTTGC-GCCTAACCCTAGTCTGCTTTTGC    472
                     .||||.||||||||..|.||.||.|| |.|.|.|||.| |.|.|||.|||
BL03292___ytl    424 AGGGCGGCGCTTGCCCGCACTCTCGCTGTCGACCCCGA-TATCCTTCTGC    472

BSNT_04454___    473 TGGATGAGCCATTTTCCGCGCTTGATTTTCAGACAAAGCTG----TCTTT    518
                     |.|||||.||.|||||.||.|||||.|.|||||||||..||    ||   
BL03292___ytl    473 TTGATGAACCTTTTTCAGCCCTTGACTATCAGACAAAATTGAACCTC---    519

BSNT_04454___    519 GGAAAACCTGGTATTCCGCACATTAAAGGAATATCAAAAAACAGCAGTGC    568
                      |||.|..|.||.|||..|||.||||||...||||||||||||||.||||
BL03292___ytl    520 -GAAGATTTAGTGTTCAACACGTTAAAGACGTATCAAAAAACAGCGGTGC    568

BSNT_04454___    569 TTGTCACTCATGATATAGGGGAAGCGATAGCGATGAGCGATACGATCTTT    618
                     |.||.||.||||||||.||.||||||||||||||||||||...|||..|.
BL03292___ytl    569 TCGTGACCCATGATATCGGTGAAGCGATAGCGATGAGCGACCGGATTCTG    618

BSNT_04454___    619 TTATTTTCAAATCAGCCGGGCACCATCCATCAGATTTTTACCATTCCTAA    668
                     .||||||||||.|||||||||||.||||||.|.|..|||.||.|||||  
BL03292___ytl    619 CTATTTTCAAAGCAGCCGGGCACTATCCATAAAACATTTGCCGTTCCT--    666

BSNT_04454___    669 GGAATTGGCCG----CGATGTTG---CCTTTTGACGCCCGTCAGGAACCT    711
                      |||    |||    .||.|.||   ||.|||||.||..|.||||||||.
BL03292___ytl    667 -GAA----CCGATCAGGAAGCTGACACCGTTTGAAGCGAGGCAGGAACCG    711

BSNT_04454___    712 TCCTTCCAGACACTGTTTCA-AACGATATGGAAGGAGCTGAATTCTCTTG    760
                     ...||.|||.|.||.||||| ||| ||||||||||||||.|||...||||
BL03292___ytl    712 GAATTTCAGCCCCTCTTTCAGAAC-ATATGGAAGGAGCTCAATGACCTTG    760

BSNT_04454___    761 AGAAACAGCAAA-----GAAACCA----TTGA    783
                        ||||.||||     |||||||    ||||
BL03292___ytl    761 ---AACAACAAACATCCGAAACCAAAAGTTGA    789


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04454 and BL03292

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
