Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03477 and BL03279

See DNA alignment / Visit BSNT_03477 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_03477___ypuA.1.5803.seq
#    -bsequence pep-align/BL03279.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03477___ypuA-BL03279.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03477___ypuA-BL03279.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03477___ypuA
# 2: BL03279
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     214/299 (71.6%)
# Similarity:   253/299 (84.6%)
# Gaps:          10/299 ( 3.3%)
# Score: 1098.0
# 
#
#=======================================

BSNT_03477___      1 MKKIWIGMLAAAVLLLTVPKVSLADAAVGDVIVTLGADLSESDKQKVLDE     50
                     |||..:|:..|..||: .|:||.|||||||||||||.|||..|:||||.|
BL03279            1 MKKSILGIFTALCLLI-FPQVSFADAAVGDVIVTLGKDLSSQDRQKVLKE     49

BSNT_03477___     51 MNVPDNATTVTVTNKEEHEYLGKYISNAQIGSRAISSSSITIAKKGSGLN    100
                     ||.|:|||.:.|||.|||:|||.||..||||:|||||||||:||||:||.
BL03279           50 MNAPENATIIEVTNDEEHKYLGDYIPKAQIGTRAISSSSITVAKKGTGLE     99

BSNT_03477___    101 VETHNISGITDEMYLNALMTAGVKDAKVYVTAPFEVSGTAALTGLIKAYE    150
                     |:|||||.|||||||||||||||||||||||||||||||||||||:||||
BL03279          100 VQTHNISRITDEMYLNALMTAGVKDAKVYVTAPFEVSGTAALTGLMKAYE    149

BSNT_03477___    151 VSSDEAISEDVKQVANQELVTTSELGDKIGNENAAALIAKIKEEFAKNGV    200
                     .:|.|.||||||:|||:|||||||||:|||:|||:||:||:|||.:||||
BL03279          150 TTSGEKISEDVKKVANEELVTTSELGEKIGSENASALMAKVKEEISKNGV    199

BSNT_03477___    201 PDNKADIEKQVDDAASDLNVTLTDSQKNQLVSLFNKMKNADIDWGQVSDQ    250
                     |::|.::||.:|.|||:|.||||:.|||.|:||||.|||.:|||.||.||
BL03279          200 PESKEELEKTIDSAASELGVTLTEDQKNSLISLFNNMKNINIDWNQVGDQ    249

BSNT_03477___    251 LDKAKDKITKFIESDEGKNFIQKVIDFFVSIWNAIVSIFK---------    290
                     |||||||||||::|:||:||:||:||||||:||||||:|.         
BL03279          250 LDKAKDKITKFLDSEEGQNFLQKLIDFFVSLWNAIVSVFTGGGTSESNG    298


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