Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02952 and BL03276

See DNA alignment / Visit BSNT_02952 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02952___yndL.1.5803.seq
#    -bsequence pep-align/BL03276.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02952___yndL-BL03276.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02952___yndL-BL03276.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02952___yndL
# 2: BL03276
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     148/277 (53.4%)
# Similarity:   186/277 (67.1%)
# Gaps:          25/277 ( 9.0%)
# Score: 731.0
# 
#
#=======================================

BSNT_02952___      1 MKPAKVSLLRRLLHSLKH-VDCNIAKRFPSTIKIVKLLFIFMVFT-PIS-     47
                     |||||||||.|||..||. ||||...||.:....|.:|.|..|.: |.| 
BL03276            1 MKPAKVSLLHRLLQCLKQCVDCNTVNRFTAINIFVNILLISAVISFPYSA     50

BSNT_02952___     48 ----SIYAEDIYQNFEELKNNEDPSDYGVVTKETGSPVLVLAIHGGGIEG     93
                         :..:.|.|.:||||:.||||:.|.:..|....|:|::||||||||.
BL03276           51 AAHGATQSGDQYSSFEELERNEDPASYRITEKNARVPMLIMAIHGGGIEP    100

BSNT_02952___     94 GTSEVARELSKEYSMYLFEGLKSAGNSVLHITSTHFDEPRALKMTGNHEY    143
                     ||||:|.|:||.||:||||||||:||:.||||||.||||.||.:|.:|:|
BL03276          101 GTSEIANEVSKNYSLYLFEGLKSSGNTDLHITSTRFDEPAALAITASHQY    150

BSNT_02952___    144 VISLHGYAEEDQQIEVGGTDRVRAADLVEKLQHAGFPAVLLNTDHPHAGV    193
                     |:|||||..||:.|:||||||.:...||::|..:||.|.:|.||..:||.
BL03276          151 VMSLHGYYSEDRDIKVGGTDRAKIRILVDELNRSGFAAEMLGTDDKYAGT    200

BSNT_02952___    194 SPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYKFTEV    243
                     .||||||||.:|||||:|||||||||||..|:||.||.||||.||:||::
BL03276          201 HPNNIANKSLSGLSIQLEMSTGFRKSLFDRFTLKDRAATQNETFYRFTKL    250

BSNT_02952___    244 MFRFLKYSY------------------    252
                     :..|:..:|                  
BL03276          251 LTDFIHENYEEDGGDFPSAKIKHPLQV    277


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