Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03479 and BL03275
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence pep-align/BSNT_03479___lysA.1.5803.seq
# -bsequence pep-align/BL03275___lysA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03479___lysA-BL03275___lysA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03479___lysA-BL03275___lysA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03479___lysA
# 2: BL03275___lysA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 361/441 (81.9%)
# Similarity: 406/441 (92.1%)
# Gaps: 2/441 ( 0.5%)
# Score: 1931.0
#
#
#=======================================
BSNT_03479___ 1 MTLFLHGTSRQNQHGHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSF 50
:|||||||||:.|||||||||.|.|||:|||||||||||||||||:.|
BL03275___lys 1 --MFLHGTSRQNERGHLEIGGVDVLSLAERYGTPLYVYDVALIRERARKF 48
BSNT_03479___ 51 KQAFIFAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSGGELYTAVAA 100
::||..||||||||||||||||||||||||:|||||||||||||:||:.|
BL03275___lys 49 QKAFKEAGLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSGGELFTAIKA 98
BSNT_03479___ 101 GFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGH 150
|||||||||||||||.|||.|||||:|||||:|||:|||:.|||||.:|.
BL03275___lys 99 GFPAERIHFHGNNKSPEELAMALEHQIGCIVLDNFHEIAITEDLCKRSGQ 148
BSNT_03479___ 151 SIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEH 200
::|||||||||||||||||||||||||||||||||||.|:||||||:|..
BL03275___lys 149 TVDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQVEQAIEQVLRSSA 198
BSNT_03479___ 201 IQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGG 250
.:||||||||||||||||||||||:|||:||.|||::|||:.:|||||||
BL03275___lys 199 FKLLGVHCHIGSQIFDTAGFVLAADKIFEKLAEWRETYSFIPEVLNLGGG 248
BSNT_03479___ 251 FGIRYTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGD 300
||||||:|||||.|..||||||||||.||..:||||||||||||||||||
BL03275___lys 249 FGIRYTKDDEPLAADVYVEKIIEAVKANAEHFGFDIPEIWIEPGRSLVGD 298
BSNT_03479___ 301 AGTTLYTVGSQKEVPGVRQYVAVDGGMNDNIRPALYQAKYEAAAANRIGE 350
|||||||:||||||||:|:|||:||||:||||||||:||||||.|||:.:
BL03275___lys 299 AGTTLYTIGSQKEVPGIRKYVAIDGGMSDNIRPALYEAKYEAAVANRMND 348
BSNT_03479___ 351 AHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGAYGYSMANNY 400
|...|.||||||||||||||||:::|||::||:|||||||||||||||||
BL03275___lys 349 ACHDTASIAGKCCESGDMLIWDLEIPEVRDGDVLAVFCTGAYGYSMANNY 398
BSNT_03479___ 401 NRIPRPAVVFVENGEAHLVVKRETYEDIVKLDLPFKTGVKQ 441
||||||||||||:|||.||::|||||||||||||.|:.|||
BL03275___lys 399 NRIPRPAVVFVEDGEAQLVIQRETYEDIVKLDLPLKSKVKQ 439
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