Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00197 and BL03273
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_00197___sigH.1.5803.seq
# -bsequence pep-align/BL03273___sigH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00197___sigH-BL03273___sigH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00197___sigH-BL03273___sigH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00197___sigH
# 2: BL03273___sigH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity: 206/223 (92.4%)
# Similarity: 215/223 (96.4%)
# Gaps: 5/223 ( 2.2%)
# Score: 1040.0
#
#
#=======================================
BSNT_00197___ 1 MNLQNNKGKFNKEQ-----FCQLEDEQVIEKVHVGDSDALDYLITKYRNF 45
||||||:|||:||| |||||||||||.|||||||||||||||||||
BL03273___sig 1 MNLQNNQGKFSKEQFSKERFCQLEDEQVIEMVHVGDSDALDYLITKYRNF 50
BSNT_00197___ 46 VRAKARSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCIT 95
|||||||||||||||||||||||||||||||||:||||||||||||||||
BL03273___sig 51 VRAKARSYFLIGADREDIVQEGMIGLYKSIRDFREDKLTSFKAFAELCIT 100
BSNT_00197___ 96 RQIITAIKTATRQKHIPLNSYVSLDKPIFDEESDRTLLDVISGAKTLNPE 145
||||||||||||||||||||||||||||:||||||||||||||||.:|||
BL03273___sig 101 RQIITAIKTATRQKHIPLNSYVSLDKPIYDEESDRTLLDVISGAKVMNPE 150
BSNT_00197___ 146 EMIINQEEFDDIEMKMGELLSDLERKVLVLYLDGRSYQEISDELNRHVKS 195
|:|||||||||||:||||||||||||||.||||||||||||:||||||||
BL03273___sig 151 ELIINQEEFDDIELKMGELLSDLERKVLALYLDGRSYQEISEELNRHVKS 200
BSNT_00197___ 196 IDNALQRVKRKLEKYLEIREISL 218
|||||||||||||||||:|||||
BL03273___sig 201 IDNALQRVKRKLEKYLELREISL 223
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